fam102aa (LOC106579973)


Basic Information

Item Value
gene id fam102aa
gene name LOC106579973
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 51281663 ~ 51304505 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021621242.2
TTCGTTTTGGAACCGGGCAGCCAGATTCACAGTTCAAAGCCCACGGCTAAATCTTCTCAAAACAAAAGTTATGTAGCCTAGGCACCTGTAGAAATGAGTAGGATTGTGTGTTTTCACTTGCAAAAGTGATTGATTTTGATAAAAACTTATTGCCAATGAAAACTTGTTAgaaaattcaaaaatatattttctggAAAATAAATGTAGGTTTCTGTATGATGCACCATATTGCCTTCTTGACAACATTGGCGCAGATTACTGTTTGTTTTGCGAAAGGCGCTCCTCCCTCACCGTTTTTCCCGTCACGTCACCGGCCATAGACCGGTACACCGTGGCTCAGGTATTCGAACTCCATCAACGGTATTGTTTCGGGGTAATAATACTGTCCATTAGGGTTGTCTTTCTTTAAGTGTGTGGGTCACCAATGGCATGTGAATTGTCTCTTTCTTATCTTTAGCTGGCGATATAAGAAAAAGAGATACATGTCAGGAGTTGTATTTCATATAGCATCAGAGGCTGGTTTTAACAGAAAAGTTTCAGACAAATGTGTTGCTTGTTCTACTATGGTTTGTTCTCCAAGCTGGCTGGTCGTTAGCCCAACAGCATTTGAGCCCGCATTGCATCAAGCGCACAAGAAAAAGTTGTGAGGTGACAATCTAAACTGTGGTTCGGTCTCAAGGTTCATTAAAATATCCATCAATGGCTTTTTTTGTGAAAAAGAAGAAATTCAAGTTTCAGACACATTTGACATTGGAGGAGCTGACCGCTGTGCCTTTTGTCAACGGAGTATTGTTCTGCAAGCTTCGATTGTTGGACGGTGGAGACTTTGTTGCAACTTCATCAAGAGTGGAGGTTCAGGAGAACTGTGTTCGATGGAAGAAGAGGTTTACCTTTTTGTGTAAAATGAGTGCCAACCCCACAACTGGAGTGCTGGATCCCTCGATCTGTCGGGTTTCTGTGCGGAAGGAACTCAAAGGAGGAAAAACGTATTCAAAGCTGGGTTTTACTGACCTAAACATGGCAGAGTTCGCTGGCTCAGGCTCTGCAGTCCGCTGTTGTCTACTGGAGGGATACGACACCAAGAATACCAGACAGGACAACTCCATACTGAAGGTGACTATCGGGATGACCCTCCTCTCTGGAGATCCGTGCTTTAAAACCGCCCCCAGCACAGCCAAGTCCATCTCGATCTCAGGCCAGGACCATACCCTGCAGCTAGACTGCAAGGGTGAGGGCACTGGAACCCCTAACCGTCCCCCTTCTTTGGGCCGGTCCATGAAGCCCAGGCCCTCTGTCATCAGCTCAGGACTTCCAGAGGAGCCAGACCAGACCCAGATGGCCAGCCCAGGAGAAGTGTTCCAGTCGGGCCACTCTCGCAACTCCAGCTACGCTAGCCAGCTGAGCAAGATCTCAGGCTACAGCACAGAGCACTCCTGCTCCTCCAGTATGTCTGATCTCACACACCGGAGGAACACCTCCACAGGAAGCAGCACCTCTGGGGGCCTGAGTGTGACCGTAGACACCCCCCCAGAGAGGGAAAGCGACATCTGCCGGCCAGAGAGACCCCCTCGCCCCCCACGGCCCATCCTGCCATCCAACAGACCCCCCAGGAGGAAGCAGGATTCTGTGGAGAGCCATCCCTCCTGGGTGAATGACACCCGCATCGATGCTGACGATATAGTTGAAAAGATCGTCCAGAGCCAGAACTTTGGTGACATAAGTAACACTGAAGACAGTAACCTGCGATTGTTTGTCAGTAGAGACGGGACCACTTCCCTGAATGAGCTACAGCTTGGAAacagGGTGTCCGCCGGTGTCTATGAGCCAGTTGTGATTGAGAGCCATTAGGACTGGTGAAGATGTGAGTTTAAGTTGAGGCCTCTGTGGTCAAGCTTGTGGACTAACTCTAGAAACATATGGTAGTCATCTTGGAGCACCAGCTGAGCTGGTTGCCATGAGAGGAGGACTGTACCGCACAGTTTTCATGTTTAGTTGTGGATCTGTTTACCCTATGGGGTCTGATTGATTGTAAACTGTTTTTGTCtggtcattttgcactttatttctAATGTGTTGTATCCCCAGAAGATGTGGCTTAAGTCTGAACTCATTTCAGCTGTATGTTGTTACAGTATCTTTGTTTCCATGGTAAATTTCTTGTCCTGTTGATCAGGAAGTGACATCATGCATTTCTCTATCCTCAGCCTTTCCACAAATATTGAAAAATAACGATCGGACAAATGTAATACTGTAAAGATAATATCCAATACAAATTGTATGCGCTACTTTAGAATGTATTTTTCTCATACATGACCCAAAGCACCAGATCATCTCTGTGATGACAGTGCTAGTCACTATTGGAGGAGAGCTGGTGATGGAGAAGAGGGAAAGTTCTCAGCACTGGTCTgactggtttcaatcccatttaGATTGTAGTACTCTGGCGCCCCCTTGTGAAGAAATGGCCTGTTGAGGGATCAGTCTCTGATCTTCAATCATGTCCCCAAACTGGTAGGTCCTAGCCTGTCATTTTTAGTGTTTACAAATCTCAAGGAACTGGGTAGGTGTAGTAATATGGGGGAAGTTTTATATGCTATAAGTTCTAAACCCATTAGATGGCTATTTGGTGCTGTCTGATTCTCTCCGATCTGCAAACACCAAAGGGTTAAGAAGCTAGGGGTCAGACTTGACAATACCTATTCAGCAGTCGTTTACACTGGCAGATGTCTTCAAACATCTTATGAAGGATCATTCATCATTTATTTGTTTTTCCAATCAGCTTGCTGGtttgttagattttttttaaatggaattgatCAAGCACTACAGAGGTTCCctgtttattgttttttataGAATCACATTCTCAATGATGTTGAAAAATACAGAACAAATGGTTTTCCTACATATCTGAATGTAAACTGGGATATACTTTTTTCTATCATATGTGACTAATAGAGCTGTTGTTATGGACTGAATTCTCGGAGGTTTGATACACTTGTTCAGAGTTAACATTTTGCAATGTGCTGATAAATAGTATCTGTCAGTTGTCTGCCTATGAATGTCTTAAATGAGATTCTGTATTTATTGCTGtgcattatgtacaaaatatcaGTTCTCACATGGGCTAATATTGACCACAGCTGGGTTTACATTGAATGGTCTCAGGTGATGTGTGACGTTCATTGCGACAGCACTTTAGATTGaatttgttttctttctttttttttcttctttcctgTGTTTGAAGAGGGGTTTAAGCTATACACACGACCCCAGTGTCCTTACACATAAATTAGCATTTTGTCTAATCTTGTTACATTTTCTATTAATCTTAGATTGTAATTTTAACAAATGCACATGTATACTAGATTTTTAAATTAACAGTAATCTCAGTCTATTTTTGTGATCCTGCCTAAACGTTTCATGAACAATAAAAattaatttgatttttttttttctcta

Function

NR:

description
protein FAM102A

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021621242.2 True 3465 mRNA 0.43 12 51281663 51304505

Neighbor

gene id symbol gene type direction distance location
LOC110535883 LOC106579975 coding downstream 35741 51224185 ~ 51245922 (-)
sh3glb2a LOC106579977 coding downstream 57541 51206885 ~ 51224122 (-)
LOC110535879 LOC102784428 coding downstream 125323 51150393 ~ 51156340 (-)
LOC110535875 LOC106579981 coding downstream 132081 51135634 ~ 51149582 (-)
LOC110535878 LOC105014154 coding downstream 146218 51129213 ~ 51135445 (-)
LOC118937364 LOC106585457 coding upstream 60251 51364250 ~ 51370212 (-)
mmp11a LOC106579968 coding upstream 106164 51410669 ~ 51423793 (-)
LOC110535893 NA coding upstream 124975 51429480 ~ 51434945 (-)
upb1 bup1 coding upstream 155933 51460438 ~ 51471151 (-)
LOC110535896 LOC106579963 coding upstream 170036 51474541 ~ 51481565 (-)
G991028 NA non-coding downstream 2659 51275666 ~ 51279004 (-)
G991043 NA non-coding downstream 6707 51274311 ~ 51274956 (-)
G991042 NA non-coding downstream 8005 51273413 ~ 51273658 (-)
G991041 NA non-coding downstream 8740 51272658 ~ 51272923 (-)
G991039 NA non-coding downstream 11091 51270339 ~ 51270572 (-)
G991060 NA non-coding upstream 1012 51305517 ~ 51305983 (-)
G991065 NA non-coding upstream 7041 51311546 ~ 51311833 (-)
G991069 NA non-coding upstream 12257 51316762 ~ 51320232 (-)
G991025 LOC106579971 non-coding upstream 44003 51348508 ~ 51352137 (-)
G990411 NA other downstream 237355 51040780 ~ 51044308 (-)
G989880 LOC106579995 other downstream 657558 50623430 ~ 50624105 (-)
G989343 NA other downstream 1149490 50131329 ~ 50132173 (-)
G989341 NA other downstream 1159847 50120576 ~ 50121816 (-)
LOC110535846 LOC106580019 other downstream 1375411 49904325 ~ 49909935 (-)
specc1la specc1l other upstream 211041 51492045 ~ 51523279 (-)
G991349 NA other upstream 537561 51842066 ~ 51842522 (-)
ct030 LOC106579885 other upstream 3818005 55122507 ~ 55124484 (-)
adgra2 LOC106579839 other upstream 5385846 56690351 ~ 56787685 (-)

Expression


Co-expression Network