slc20a1a (s20aa)


Basic Information

Item Value
gene id slc20a1a
gene name s20aa
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 55036382 ~ 55043511 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021621409.2
TAAGCCAACAAGCAATTTAACATATAACAACATTGGCAGCGCCACTTGATATAGACCTCTCCTCCGATGACTGTTTAGCCTACAAGTGGACAGGATACTGCAGATGCTTGCTTTCTAGACACACAGTCTTTTCAATGTCAACTACTTATTGTAACAGGAACAGTGGCGCGCCAGCCTTCGGAGAGACACTTTTTTAACGACATTATTGaaCATTGTATATCATCAACCACCTGCTGAGGCTACCACACAATGGATGTCCTTTGTATATCATCGCAGTGTCTAAGAAAACTCTCACACCAGCTTTGTGTACTTAGATAACAAATATTGTTTTACCCTTCCCATCAGCCGCTTATTGAACAGAGCTCGGAAAGGAGTAAGAAAATAGCTATATTCTTTGATTTGAGGCTGGATACCTGAAACATTTATTTATTGAATCTCAAAGAAGCAATATACCTTGTTATTTATTAATCATATCGGAAAGCATTGTTAAGTAATTTTGAAACTATCCTAATATTTAGAATTTAGTTTTGAGATTCAAACACACAAGTTTTTTGCAATGGAGTCTTCCACTAGAGCATCTCTCGCAGCAGCCACCACTTTAGCTACCGCGGCCTATTCAAGCGATATGTCAGGCTACCTGTGGCTACTGATCCTGGGCTTTGTCATTGCCTTCATCCTGGCCTTCTCTGTGGGGGCCAATGATGTGGCCAACTCATTTGGCACGGCGGTGGGCTCTGGCGTGGTCACCTTACGGCAGGCCTGCATCCTGGCCACTATCTTTGAGACCGTGGGCTCCATGCTGTTAGGGGCCAAAGTCAGCGAGACCATCCGCAAGGGCATCATCGATGTGAACATGTACAATGGCTCCGAACACGTGCTGATGGCAGGCTCCATCAGTGCCATGTTTGGTTCTGCTGTGTGGCAACTGACCGCTTCATTTTTGAAGCTCCCTATATCTGGAACCCACTGTATTGTGGGTGCGACACTTGGTTTCTCCATGGTAGCCAAAGGTCATCACGGGGTCAAATGGATGGAGCTACTACGCATTGTGGCATCTTGGTTCCTCTCACCCCTGCTGTCAGGCATCATGTCAGCAATTCTCTTCTATTTTGTTCGTAAATTCATCCTGAATAAGGAGGACCCTGTTCCCAACGGCCTGAGAGCTCTCCCTGTCTTCTATGCTATCACCATGGCCATCAACCTGTTCTCCATCATGTTCACTGGAGCCCCCTTGCTGGGGTTCAACAAAATGCCATGGTGGGTAACACTGCTCATATCGCTAGGCTGCGCCCTCGTCACAGGCCTGGTCGTGTGGTTCTTCGTCTGTCCACGGCTCAAGAAGAAGATCAGGCGTAAAGTTGCCTCCAGCCCCTGTATGACTCCACTGATGGAGAAGACCCCTTCCAAACCTGCCCTACAGGAGCATCCCTCCACAATTCAACCTTGTGACTCTGTTCCCCAGACACCACCAGCCTATGAGAAAAGGGCGGCCTTTAAGATTGGAGGTTCGGAGGAGGCTGATCTGGACAGCAACATGGACACCAAAGACTTAGGTGCTAGCAGCGGTATTAATGGCATGGGCCCCATGACCATCACGGACCCACACAGTGGTCAGGCTCACACTGTACACAAGGATTCAGGGCTCTACAAAGACCTGCTGCACAAGCTTCACCTAGCCAAGGTGGGTGACTGCATTGGTGACGACGATGGGCGGCCCATACGGCGGAACAACAGCTACACCTCTTACACCCTGGCCATCTATGGCATCCATGGGGACCCCAGATACAAGGAGGGAGAGCTAGCAGATCAGCGGAGGAGATTGCGGCTAGACAGCTACAATAGCTACTGCTCGGCAGTAGCAGATGGTGGCACAGTGGCTAAGGAGGAGGCAGGGGCTGTGGGGCTGACACTGGAGGCAGGCCAGGACATACTCcaagaggaggatgagctggagGTGGACCGGCCAGAGGTCACACATCTCTTCCGGTTCCTCCAGATCCTCACTGCTTGTTTCGGCTCTTTCGCCCATGGAGGAAATGATGTCAGTAATGCGATTGGTCCTCTGGTGGCTCTGTGGCTGGTGTTTGAGAGTGGCTCTGTGGTGTCCAATGCTCCCACACCTATCTGGCTGCtgttgtatggaggagtgggcatCACTGCTGGGCTCTGGGTGTGGGGACGCAGAGTGATCCAGACCATGGGCAAGGACCTCACCCCAATCACCCCCTCCAGTGGATTTAGCATTGAACTGTCCTCAGCGCTCACAGTGGTAGTGGCCTCCAATATTGGTCTCCCTGTCAGCACAACTCACTGCAAGGTGGGCTCTGTGGTTGCTGTTGGATGGCTGCGCTCCAGGAAGGCTGTTGACTGGCGTTTGTTCAGGAACATCTTCATCGCCTGGTTTGTAACCGTCCCCATCTCTGGGCTCATCAGTGCTGCCATCATGGCTCTCTTCACCTATGTTATCCTGTGAGGTTCAAATGGACCTGGGATGACCTTGACTTCACCCCTGACGAGGGTCTACTACACCGCAGCCGGGGATACTGTTGTTTTCTCACTGACCATAGTTTAAAACTGTGTTGAAAAATGTGTGTTTCAGCATGTTTATGTTATCTGTACATATCAAGTCCTGACtctgtttctttgtttctttATACACATGTGTTTACTGCACAGTATTCAGCATCATTGAAGTTGATTACTATGTAATGTTGATCGTCTATCTATCATGTAATGAATTGTTTGAAAAATTGTAAAATGTCTAGTTTACAGAAGAACTAGGAGGTGTCCCTCCAATGGTGTTTCTAATTAAATTTTTGATTCAAAATAAAATGACATTACTAACCCA
>TU1132023
GACGCAGAGTGATCCAGACCATGGGCAAGGACCTCACCCCAATCACCCCCTCCAGTGGATTTAGCATTGAACTGTCCTCAGCGCTCACAGTGGTAGTGGCCTCCAATATTGGTCTCCCTGTCAGCACAACTCACTGCAAGGTGGGCTCTGTGGTTGCTGTTGGATGGCTGCGCTCCAGGAAGGCTGTTGACTGGCGTTTGTTCAGGAACATCTTCATCGCCTGGTTTGTAACCGTCCCCATCTCTGGGCTCATCAGTGCTGCCATCATGGCTCTCTTCACCTATGTTATCCTGTGAGGTTCAAATGGACCTGGGATGACCTTGACTTCACCCCTGACGAGGGTCTACTACACCGCAGCCGGGGATACTGTTGTTTTCTCACTGACCATAGTTTAAAACTGTGTTGAAAAATGTGTGTTTCAGCATGTTTATGTTATCTGTACATATCAAGTCCTGACtctgtttctttgtttctttATACACATGTGTTTACTGCACAGTATTCAGCATCATTGAAGTTGATTACTATGTAATGTTGATCGTCTATCTATCATGTAATGAATTGTTTGA

Function

NR:

description
Sodium-dependent phosphate transporter 1-A

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021621409.2 False 2848 mRNA 0.49 11 55036382 55043511
TU1132023 True 569 TUCP 0.47 3 55042423 55043409

Neighbor

gene id symbol gene type direction distance location
LOC110535974 vgll4 coding upstream 20444 55002395 ~ 55015938 (+)
LOC110536632 NA coding upstream 404887 54629704 ~ 54631495 (+)
LOC118937454 NA coding upstream 486671 54538988 ~ 54549711 (+)
LOC110535965 LOC106579898 coding upstream 686794 54328006 ~ 54349588 (+)
LOC110535063 LOC106579900 coding upstream 805938 54147143 ~ 54230444 (+)
LOC110535976 LOC106579886 coding downstream 1012 55044523 ~ 55070046 (+)
LOC110535979 LOC106579884 coding downstream 29363 55072874 ~ 55075806 (+)
adra1a adra1a coding downstream 95482 55136414 ~ 55157272 (+)
ddx51 ddx51 coding downstream 334172 55377683 ~ 55382284 (+)
LOC110535988 LOC106579875 coding downstream 339915 55383426 ~ 55387596 (+)
G994782 NA non-coding upstream 30298 55000945 ~ 55006084 (+)
G994779 NA non-coding upstream 38736 54997236 ~ 54997646 (+)
G994774 NA non-coding upstream 48340 54987839 ~ 54988042 (+)
G994773 NA non-coding upstream 50490 54985679 ~ 54985892 (+)
G994767 NA non-coding upstream 61724 54974061 ~ 54974658 (+)
G994738 NA non-coding downstream 10934 55054445 ~ 55055371 (+)
G994741 NA non-coding downstream 23507 55067018 ~ 55071975 (+)
G994803 NA non-coding downstream 36769 55080280 ~ 55080731 (+)
G994807 NA non-coding downstream 47314 55090825 ~ 55091056 (+)
G994808 LOC106579883 non-coding downstream 47837 55091348 ~ 55091580 (+)
G993738 NA other upstream 809919 54226131 ~ 54226463 (+)
G993612 NA other upstream 1010328 54025768 ~ 54026054 (+)
G992601 fzd10 other upstream 1586740 53446507 ~ 53449642 (+)
LOC110535061 rimbp2 other upstream 1654191 53281076 ~ 53398401 (+)
G991714 LOC106579928 other upstream 2491822 52542244 ~ 52544560 (+)
G995268 NA other downstream 311690 55355201 ~ 55357116 (+)
LOC110535064 cabin1 other downstream 446586 55489662 ~ 55577699 (+)
G995364 NA other downstream 475198 55518709 ~ 55519174 (+)
G995607 NA other downstream 959343 56002854 ~ 56004867 (+)
LOC110536010 LOC106579856 other downstream 984660 56028141 ~ 56037300 (+)

Expression


Co-expression Network