LOC110536104 (LOC106580322)


Basic Information

Item Value
gene id LOC110536104
gene name LOC106580322
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 59840378 ~ 59848113 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021621661.2
caaacgaagcatttgccagatcagagtcagtcgggatgaccagggatgttctcttgataaGTTGGCTCTAGGACCTTGAAGATGCTGGCGCAGCCGCACGATACTGCAAATGGGATTTCCTTGTCCAAGAGAGGCTGTTTACGAAGAAAGCTCTACTCCCTTCGACAAGAAAGGGCTGATCTGCAGATGGGAGCAGTTTGTCTGAATTATTCAGCATAGGCTTCCACACAAAGTTATTTTTGGGGTTGAGAAATAGCCTATCAATTTAATTTTCGTGCATATTGTTTTCGTTTGAATTAATCCTATAAATTCTACAGTATGTTTTTGTCGTTGCACTTTGTTTTGCTGAGCGTCGCTTTTGTGGACAGCGCATCCATTGTGGAAGACTGCATCAGATTCAATGGTGTGGAGTACAGAGGGGAGCAACAGAGCTCTTCCGCAGGACAAACCTGTCTAAACTGGACCAACACAACCCGGGACTATGATGTAATGGCATATACCGATTCACAAATGGGCGTTGGGGACCATAACTACTGCCGTAACCCAGACTCCTCTGAGAAGCCCTGGTGCTACGTGACTGGCCTAGACGCACAGGCCCAGAGACAATCATGTGCCATTGACACCTGCAAAGACGAAGCCCCTACAGAGGCAGGCCCCCATACCACAGCACAGAGCGAGGTCTTTGAGCTGACCAAGTCTGGGTCAGCCCAGGGAGGGGGTGCTGCGGTCCAGCCAGTCATTGGCATCAGCCAGCGGATACGCACAGGACCCAAGAAGAAGGACCTGGGCACTCTCGGCTATGTGGTTGGCATCCTCATGATGGCCATCATCATCCTCATGGGGGTGGGCATCACCTTCGGCTACTTCTACAAGAGGGGTCGGGACCTGAAGAAGCAGCATGAGGAGCGAGTGTATGAGCGGGAGATGCAGAGGATTACCCTGCCCCTGTCGGCCTTTTCCAACCCAACCTGTGAGCTGGTGGATGAGAACTCCATCGTCATCATGGCCCAGGAGCAGACCCCCACCCAGGAGGGCATGGAGGGGGGAGACCCCCTGATGGGCCAGCAGGCTGGTACCCCAGGAGCCTGAGCACTGACCACCCCACTGGACTGGGAATGAACAAGGACATTCGAACCTCAGAGGATCCAAATACTCCCCTCAGCCCccaaatcaacccccccccccccccctttttttgaAGGCCTATGAGGAGAAGGGGAGCAGGGCTGAGCTCCAAAGACTAAATTGTGTCCTTATTGCCCTGGTTTTAACACAAGTGTCACCAACAGGGGAAAAGATGACAACAGGTGGCGCTGAAGGACTAATTTCACTCCACGTGGAGACCAATCGGGGAAGGTTGTGTACAAAAGTGCATGTCAGGGATGCTCATTAAGAAACCGTGCATTTCATATCCAAGAAAACATGATCACGGGCTGACGCTCTGCTATAGCAGTATGATTGTCTTGTGAATGGGATGTGCATCAATCAACATTAATGATGGAGGGTGATGTTATAATCTTTGGATGAAGAGGAGACAGTGTTTGGAAAGGGGGAATTCATAGCCTTGACTTTTTATATTGAGGTGTTCGGCAGTTTGGTGTTATGGGCTTACCTGAGAAAACAATGCTACACTTCCCCTGGCCCTTTTGGCTGTGCTAGGGCGGGTCTGGGGAGGGCATCTAGTATAGGAATAGGATAGCCCTGTTAAACATCTGCATTAGACATCTTAAAGGCCGTTGGAACAGATGTGGAGTAATAATTAGCATGAGGGAACATTTATGTCAGATCTGCAAAAGAAAAGGAAACATCTCCTGCTCTCTGAAGCTGTGACGTTGCCTTAGCATAATGAATGTATTTGTACATGGTGACCCTTCTGTTTAACTCATAAGGCTGGGTGATAGAAACCAATGTGCAGTAACTAGAAACATCAGGCATCGGTGGCTTTACATGAGAGAACAGGCTGTATGGTTCCTTAGGTTAGAGACTGACAGGAAAAGGGAGACGTCTTTGTAAATCGGGGAGTCTGTTCTCAGGAGGAAATGCCGCAGCACAGCTGTGAAACAGAATACAGCTGAGTCTGAGGTCTGGCTAGAACCGGACAGAGGCTGTCTGAATGACGCTTGGGCAGACCAGAAGTCGGTTTAAAAGTTGAAGCCTGGGGCATTAGATTTGAATTCGTCCCAAACGTCAGGGCAAGCAGACGAGCAAAGTAAAAGGGTAAACAGGATATGAGTCCAAAACTGAGGTAACCTACCATATTTGATATGTACAGGATGGAATAATTGCATAATAAGCAGCCTGTTGCGAAACAGGATGCTGAAAGTAATGCCACAGTTGGTTAGAAAATGTAATATGTTATTGACCAACAATCTCTTGTTGGGATTAAATGTAATATCTTTCTGCTTTACATGATTGCTCTATTTTGCTAATGCAATATCTTGCATCACTCCAAATGGTTGTCTTTTGTGATTTAGACATCTTTGAAATGGTTGTCATTCTGCATCACTGGATTACTCTTCAATCATTGTGGTTCCTTAGTTTTGGTGCaatgctgatttaaaaaaaaaaagtttcttcACTGTTGCTAATCATTGGAAATGAGTATTTGTAAGTTTGGCAGATTTCAATAAAATGTACTTAAAAGCA

Function

NR:

description
phosphoinositide-3-kinase-interacting protein 1-like

GO:

id name namespace
GO:0016310 phosphorylation biological_process
GO:0016301 kinase activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021621661.2 True 2646 mRNA 0.47 7 59840378 59848113
Loading

Neighbor

gene id symbol gene type direction distance location
rhbdd3 rhbdd3 coding upstream 189382 59645825 ~ 59650996 (+)
trnaa-ugc-51 NA coding upstream 324182 59516121 ~ 59516196 (+)
LOC110536090 LOC106580338 coding upstream 447175 59389200 ~ 59393203 (+)
LOC110536086 LOC106580340 coding upstream 468929 59363887 ~ 59371838 (+)
LOC110536085 LOC106580341 coding upstream 476963 59172559 ~ 59363415 (+)
LOC110536105 LOC106580320 coding downstream 35416 59883529 ~ 59931922 (+)
LOC110536106 LOC106580319 coding downstream 127201 59975314 ~ 60109794 (+)
ficd ficd coding downstream 403093 60251206 ~ 60255083 (+)
LOC110535077 si:ch211-191d15.2 coding downstream 431921 60279228 ~ 60283592 (+)
LOC110536118 dao coding downstream 614480 60462593 ~ 60474608 (+)
G1000065 NA non-coding upstream 78293 59761821 ~ 59762085 (+)
G999636 NA non-coding upstream 199445 59640733 ~ 59640933 (+)
G999633 NA non-coding upstream 202915 59637261 ~ 59637463 (+)
G999594 NA non-coding upstream 280481 59559603 ~ 59559897 (+)
G999574 NA non-coding upstream 315993 59524128 ~ 59524385 (+)
G1000184 NA non-coding downstream 31565 59879678 ~ 59930131 (+)
G1000187 NA non-coding downstream 86313 59934426 ~ 59934522 (+)
G1000221 NA non-coding downstream 111267 59959380 ~ 59959714 (+)
G1000224 NA non-coding downstream 116974 59965087 ~ 59965302 (+)
G1000225 NA non-coding downstream 117496 59965609 ~ 59965837 (+)
G998557 LOC106588150 other upstream 1537391 58301585 ~ 58302987 (+)
G997824 NA other upstream 2051207 57787468 ~ 57789171 (+)
LOC110536038 LOC106579834 other upstream 2776798 57044708 ~ 57072429 (+)
LOC110536021 LOC106579845 other upstream 3407107 56386314 ~ 56434657 (+)
LOC110535084 lnpep other downstream 1346978 61180837 ~ 61206347 (+)
LOC110536169 LOC106580482 other downstream 1939150 61787232 ~ 61802788 (+)
G1002117 NA other downstream 2453064 62301177 ~ 62302835 (+)
LOC110536190 LOC103397138 other downstream 2643068 62490915 ~ 62494341 (+)
G1004025 LOC106580455 other downstream 3707852 63555965 ~ 63558816 (+)

Expression

LOC110536104(LOC106580322) Expression in all Baseline Samples

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The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 100.
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LOC110536104(LOC106580322) Expression in each Bioproject

Bar chart with 21 bars.
LOC110536104(LOC106580322) Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 1000.
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Co-expression Network