Item | Value |
---|---|
gene id | gpat2 |
gene name | LOC106580447 |
gene type | coding |
species | rainbow trout (Oncorhynchus mykiss) |
category of species | economic fish |
Item | Value |
---|---|
chromosome id | NC_048575.1 |
NCBI id | CM023229.2 |
chromosome length | 86280908 |
location | 62935274 ~ 62986437 (-) |
genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
description |
---|
glycerol-3-phosphate acyltransferase 2, mitochondrial-like |
id | name | namespace |
---|---|---|
GO:0008152 | metabolic process | biological_process |
GO:0016746 | transferase activity, transferring acyl groups | molecular_function |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
XM_036936094.1 | False | 3490 | mRNA | 0.50 | 22 | 62935274 | 62983624 |
XM_036936095.1 | False | 3042 | mRNA | 0.52 | 23 | 62935274 | 62985909 |
XM_036936093.1 | False | 3047 | mRNA | 0.52 | 23 | 62935274 | 62986437 |
XM_036936096.1 | False | 3032 | mRNA | 0.52 | 23 | 62935274 | 62986437 |
XM_036936097.1 | False | 3023 | mRNA | 0.52 | 23 | 62935274 | 62986437 |
XM_036936098.1 | False | 3008 | mRNA | 0.52 | 23 | 62935274 | 62986437 |
XM_036936099.1 | False | 3102 | mRNA | 0.51 | 23 | 62935274 | 62986437 |
XM_036936100.1 | False | 2924 | mRNA | 0.51 | 22 | 62935274 | 62986437 |
XM_036936101.1 | True | 2813 | mRNA | 0.51 | 21 | 62935274 | 62986437 |
62,930,000
62,940,000
62,950,000
62,960,000
62,970,000
62,980,000
62,980,000
62,990,000
63,000,000
63,010,000
63,020,000
63,030,000
NC_048575.1
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
zgc:152830 | LOC106580446 | coding | downstream | 7791 | 62920442 ~ 62927483 (-) |
LOC110536211 | pcna | coding | downstream | 15473 | 62916347 ~ 62919801 (-) |
LOC110536207 | LOC106580444 | coding | downstream | 55400 | 62804837 ~ 62879874 (-) |
LOC110536206 | LOC106580443 | coding | downstream | 131074 | 62740236 ~ 62804200 (-) |
LOC110536205 | LOC106580442 | coding | downstream | 195722 | 62720355 ~ 62739552 (-) |
LOC118937456 | NA | coding | upstream | 20242 | 63006679 ~ 63008096 (-) |
adra2b | LOC106580448 | coding | upstream | 260090 | 63246527 ~ 63253768 (-) |
dusp2 | LOC106580476 | coding | upstream | 282188 | 63268625 ~ 63272680 (-) |
LOC110535091 | izumo1 | coding | upstream | 289550 | 63275987 ~ 63278272 (-) |
idua | idua | coding | upstream | 317499 | 63303936 ~ 63316827 (-) |
G1003400 | NA | non-coding | downstream | 226119 | 62704461 ~ 62709155 (-) |
G1003398 | LOC106580440 | non-coding | downstream | 233356 | 62701616 ~ 62701918 (-) |
G1003397 | NA | non-coding | downstream | 235097 | 62699918 ~ 62700177 (-) |
G1003392 | NA | non-coding | downstream | 260963 | 62673933 ~ 62674311 (-) |
G1003390 | NA | non-coding | downstream | 266832 | 62667887 ~ 62668442 (-) |
G1003495 | NA | non-coding | upstream | 1600 | 62988037 ~ 62988241 (-) |
G1003496 | NA | non-coding | upstream | 1807 | 62988244 ~ 62988510 (-) |
G1003498 | NA | non-coding | upstream | 6378 | 62992815 ~ 62993047 (-) |
G1003509 | NA | non-coding | upstream | 35603 | 63022040 ~ 63022267 (-) |
G1003575 | NA | non-coding | upstream | 80176 | 63066613 ~ 63066818 (-) |
LOC110536201 | LOC106580439 | other | downstream | 245952 | 62663428 ~ 62689389 (-) |
LOC110536162 | NA | other | downstream | 1293843 | 61636026 ~ 61657316 (-) |
mrps36 | LOC106580406 | other | downstream | 1339864 | 61592425 ~ 61595436 (-) |
LOC110535085 | setbp1 | other | downstream | 1604067 | 61269833 ~ 61331394 (-) |
G1004487 | NA | other | upstream | 815092 | 63801529 ~ 63802002 (-) |
G1005628 | LOC106580457 | other | upstream | 1374327 | 64360764 ~ 64363777 (-) |
G1006106 | NA | other | upstream | 2112523 | 65098960 ~ 65099556 (-) |
G1007506 | NA | other | upstream | 3386205 | 66372642 ~ 66372949 (-) |
G1009720 | NA | other | upstream | 4984634 | 67971071 ~ 67971328 (-) |