erlin2 (erln2)


Basic Information

Item Value
gene id erlin2
gene name erln2
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 66252344 ~ 66279789 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036936159.1
CACGACCTCCTGGTATCAAAAGTCTGCTTCCTGTCATTGCTTGACTTGAGGATGGCACAGTTGGGTGCCATAGCCTCAATAATCTGTGCAATTGGAGGTGcagctctcttctcttctgtgcACAAGATTGAGGAGGGACACACTGGAGTTTACTACAGAGGAGGAGCTCTCCTGACCACCACCAGTAGCCCTGGCTTCCACCTCATGATGCCCTTCATCACTCATTTCAAGTCTGTGCAGACCACTCTACAGACAGATGAAGTGAAGAATGTACCGTGTGGAACAGGtggTGGAGTGATGATTTACTTTGACCGGATAGAAGTGGTGAACTACCTCGTACCCTCAGCAGTGTATGATATAGTGAAGAACTTCACAGCGGATTACGACAAGGCCCTAATATTCAATAAGGTTCACCATGAGCTCAACCAGTTCTGCAGTGTCCATTCTCTTCAGGAGGTCTACATCGGCTTGTTCGACCAGATAGATGAGAACCTGAAGCTGACCTTACAAGAAGATCTGACCAGCATGGCTCCTGGACTGATCATACAGGCGGTCCGGGTCACGAAGCCCAACATCCCTGAGAGCATTCGCAGGAACTATGAGATGATGGAGGCCGAGAAGACAAAGCTGCTGATTTCTGCTCAGACTCAGAAGGTAGTGGAGAAGGAGGCGGAGACAGAGCGAAAGAGGGCTGTGATTGAGGCAGAGAAGGTGGCTCAAGTGGCGGAAATCAAGTTTAGCCAGAAAGTCatggagaaagaaacagagaaaacAATCTCTGAAATTGAAGACAGGGCTTTCCTGGCCAAGATGAGAGCCAGGGCCGATGCAGAGTTCTACACAGCACAAAGAGCCGCTGAGGCCAATAAGtTGAAGCTGACGCCAGAGTACCTGCAGCTGATGAAGTTCCAGGCCATAGCAGCTAACAGTAAGATCTACTTTGGCAGTGAGATCCCCCAGATGTTTGTTGACTCTGGGCCAGGCACATCTAAGGCCTCAGCTGCCATGGACGTCCTAGCTGAACAGATCCTGGACCTGgactgatggagaggagagacccATTCTAGGGCTGGAGCTGGGCCAAGGCCAGGCACAAGGTGTGGTGGCAGAGGAGCCTTGGGTTTTTGTTTGGTTTTtatgaatcccaaatggcaccttattccctatatagtgtactactatagtgcactactatccATAGGCctcctgtcaaaagtagtgcactatatagggaataggttgccatttgggatgcaaacctgGACCAGGAGGCTTTATTAGCTCTACAACAGACTATCCTGAGAAGACCGTAGGCGAAACAAAGAGATATTGAATGTAACAGCGTAATGTGGTTTGTTTCTGTTGGCTGAATTATCactttttgtttttgtgttgtatTGTTTTTCTAATTTCCTCTTGCACCAGGGACATTTAAACATTAACTGAACTTATGCAAGTGTGTGATGTATGTTTTTTTTCCATTGTTACTTCATTTGGTAGCGCTTTCTTGTATTTTCTAATGATGGTTGTCTTTTATGTGTTGCATAGCTCATAATAAGTAAGAGATGTGTACAGAGAGACAGTGATTCATGTGTGTGATTCATTATTTTATAACTAAAATGTTGGGATTACCTTGTTTCTTTATACAGACCTCTCTCCCATAAGAATTGTCTTGCTATCTTTACTATCTTGCCAGGGTCTTATCACAACAACAGATGTAACAGATCTTGACTGAACACATAATTGTGCATTTTTTCTCTCATGTACATTATCTCTTGTATAGAGTTGTCACAGTGTGATTTCTtcacagaaaaacaaacaaaagctAATTACTTTATTGGAAGGATTTGGTAATGGATTCAATGGTATAATGATCTCAATGGGGTTGTAAATGAAAGATGCAGCATCAgcttttttaactctgcatttcaCTCACTGGTACCCTCAGTGTTGGAGACAAAGCTCATTTGGGGTTAATCATTTGTATGTTTTTCACCAGTGCTTAACTAAACTTGTTTGTGAGGCATTTGATTCTTGTACTGTGTATCTATAAAACTGTTCTCTTAATGTAACTCTGGTTTGCTCTGCGTTAGCCGTGCGAGTGACTACCTGTATAAACTGTTTTAGACTCGCTCAGGTTGACTTGACTGATTACTTGAAGGGAACTGTTTTTGCACTCTCACTGATATTAAATTGTGAATGAGCAATCCATAATTTTGTCATTTATACAATAAAATTAGTTTTCCTTTGTA
>XM_021621939.2
GAGCCTGGTAGCaggtgtttgcttatttttgtcGGTGGAGGAGGCATCTCGAGTGATAATACTACAGGTAATAGTACGGATTTCCAGAACACTTTTGTCAATGTGGTTTAACGTACCTATCAAGTATCTACAATGACAACAATGATGGCACAGTTGGGTGCCATAGCCTCAATAATCTGTGCAATTGGAGGTGcagctctcttctcttctgtgcACAAGATTGAGGAGGGACACACTGGAGTTTACTACAGAGGAGGAGCTCTCCTGACCACCACCAGTAGCCCTGGCTTCCACCTCATGATGCCCTTCATCACTCATTTCAAGTCTGTGCAGACCACTCTACAGACAGATGAAGTGAAGAATGTACCGTGTGGAACAGGtggTGGAGTGATGATTTACTTTGACCGGATAGAAGTGGTGAACTACCTCGTACCCTCAGCAGTGTATGATATAGTGAAGAACTTCACAGCGGATTACGACAAGGCCCTAATATTCAATAAGGTTCACCATGAGCTCAACCAGTTCTGCAGTGTCCATTCTCTTCAGGAGGTCTACATCGGCTTGTTCGACCAGATAGATGAGAACCTGAAGCTGACCTTACAAGAAGATCTGACCAGCATGGCTCCTGGACTGATCATACAGGCGGTCCGGGTCACGAAGCCCAACATCCCTGAGAGCATTCGCAGGAACTATGAGATGATGGAGGCCGAGAAGACAAAGCTGCTGATTTCTGCTCAGACTCAGAAGGTAGTGGAGAAGGAGGCGGAGACAGAGCGAAAGAGGGCTGTGATTGAGGCAGAGAAGGTGGCTCAAGTGGCGGAAATCAAGTTTAGCCAGAAAGTCatggagaaagaaacagagaaaacAATCTCTGAAATTGAAGACAGGGCTTTCCTGGCCAAGATGAGAGCCAGGGCCGATGCAGAGTTCTACACAGCACAAAGAGCCGCTGAGGCCAATAAGtTGAAGCTGACGCCAGAGTACCTGCAGCTGATGAAGTTCCAGGCCATAGCAGCTAACAGTAAGATCTACTTTGGCAGTGAGATCCCCCAGATGTTTGTTGACTCTGGGCCAGGCACATCTAAGGCCTCAGCTGCCATGGACGTCCTAGCTGAACAGATCCTGGACCTGgactgatggagaggagagacccATTCTAGGGCTGGAGCTGGGCCAAGGCCAGGCACAAGGTGTGGTGGCAGAGGAGCCTTGGGTTTTTGTTTGGTTTTtatgaatcccaaatggcaccttattccctatatagtgtactactatagtgcactactatccATAGGCctcctgtcaaaagtagtgcactatatagggaataggttgccatttgggatgcaaacctgGACCAGGAGGCTTTATTAGCTCTACAACAGACTATCCTGAGAAGACCGTAGGCGAAACAAAGAGATATTGAATGTAACAGCGTAATGTGGTTTGTTTCTGTTGGCTGAATTATCactttttgtttttgtgttgtatTGTTTTTCTAATTTCCTCTTGCACCAGGGACATTTAAACATTAACTGAACTTATGCAAGTGTGTGATGTATGTTTTTTTTCCATTGTTACTTCATTTGGTAGCGCTTTCTTGTATTTTCTAATGATGGTTGTCTTTTATGTGTTGCATAGCTCATAATAAGTAAGAGATGTGTACAGAGAGACAGTGATTCATGTGTGTGATTCATTATTTTATAACTAAAATGTTGGGATTACCTTGTTTCTTTATACAGACCTCTCTCCCATAAGAATTGTCTTGCTATCTTTACTATCTTGCCAGGGTCTTATCACAACAACAGATGTAACAGATCTTGACTGAACACATAATTGTGCATTTTTTCTCTCATGTACATTATCTCTTGTATAGAGTTGTCACAGTGTGATTTCTtcacagaaaaacaaacaaaagctAATTACTTTATTGGAAGGATTTGGTAATGGATTCAATGGTATAATGATCTCAATGGGGTTGTAAATGAAAGATGCAGCATCAgcttttttaactctgcatttcaCTCACTGGTACCCTCAGTGTTGGAGACAAAGCTCATTTGGGGTTAATCATTTGTATGTTTTTCACCAGTGCTTAACTAAACTTGTTTGTGAGGCATTTGATTCTTGTACTGTGTATCTATAAAACTGTTCTCTTAATGTAACTCTGGTTTGCTCTGCGTTAGCCGTGCGAGTGACTACCTGTATAAACTGTTTTAGACTCGCTCAGGTTGACTTGACTGATTACTTGAAGGGAACTGTTTTTGCACTCTCACTGATATTAAATTGTGAATGAGCAATCCATAATTTTGTCATTTATACAATAAAATTAGTTTTCCTTTGTA
>XM_021621940.2
CTCGTTGTCCCCCTCTGTTGGTCTTGTGGGATATTTCCTCGTTGAAGAACGTCCAACTGAAGACGTATGACGCAAAATGCGGAAGTGAGCCTGGTAGCaggtgtttgcttatttttgtcGGTGGAGGAGGCATCTCGAGTGATAATACTACAGGATGGCACAGTTGGGTGCCATAGCCTCAATAATCTGTGCAATTGGAGGTGcagctctcttctcttctgtgcACAAGATTGAGGAGGGACACACTGGAGTTTACTACAGAGGAGGAGCTCTCCTGACCACCACCAGTAGCCCTGGCTTCCACCTCATGATGCCCTTCATCACTCATTTCAAGTCTGTGCAGACCACTCTACAGACAGATGAAGTGAAGAATGTACCGTGTGGAACAGGtggTGGAGTGATGATTTACTTTGACCGGATAGAAGTGGTGAACTACCTCGTACCCTCAGCAGTGTATGATATAGTGAAGAACTTCACAGCGGATTACGACAAGGCCCTAATATTCAATAAGGTTCACCATGAGCTCAACCAGTTCTGCAGTGTCCATTCTCTTCAGGAGGTCTACATCGGCTTGTTCGACCAGATAGATGAGAACCTGAAGCTGACCTTACAAGAAGATCTGACCAGCATGGCTCCTGGACTGATCATACAGGCGGTCCGGGTCACGAAGCCCAACATCCCTGAGAGCATTCGCAGGAACTATGAGATGATGGAGGCCGAGAAGACAAAGCTGCTGATTTCTGCTCAGACTCAGAAGGTAGTGGAGAAGGAGGCGGAGACAGAGCGAAAGAGGGCTGTGATTGAGGCAGAGAAGGTGGCTCAAGTGGCGGAAATCAAGTTTAGCCAGAAAGTCatggagaaagaaacagagaaaacAATCTCTGAAATTGAAGACAGGGCTTTCCTGGCCAAGATGAGAGCCAGGGCCGATGCAGAGTTCTACACAGCACAAAGAGCCGCTGAGGCCAATAAGtTGAAGCTGACGCCAGAGTACCTGCAGCTGATGAAGTTCCAGGCCATAGCAGCTAACAGTAAGATCTACTTTGGCAGTGAGATCCCCCAGATGTTTGTTGACTCTGGGCCAGGCACATCTAAGGCCTCAGCTGCCATGGACGTCCTAGCTGAACAGATCCTGGACCTGgactgatggagaggagagacccATTCTAGGGCTGGAGCTGGGCCAAGGCCAGGCACAAGGTGTGGTGGCAGAGGAGCCTTGGGTTTTTGTTTGGTTTTtatgaatcccaaatggcaccttattccctatatagtgtactactatagtgcactactatccATAGGCctcctgtcaaaagtagtgcactatatagggaataggttgccatttgggatgcaaacctgGACCAGGAGGCTTTATTAGCTCTACAACAGACTATCCTGAGAAGACCGTAGGCGAAACAAAGAGATATTGAATGTAACAGCGTAATGTGGTTTGTTTCTGTTGGCTGAATTATCactttttgtttttgtgttgtatTGTTTTTCTAATTTCCTCTTGCACCAGGGACATTTAAACATTAACTGAACTTATGCAAGTGTGTGATGTATGTTTTTTTTCCATTGTTACTTCATTTGGTAGCGCTTTCTTGTATTTTCTAATGATGGTTGTCTTTTATGTGTTGCATAGCTCATAATAAGTAAGAGATGTGTACAGAGAGACAGTGATTCATGTGTGTGATTCATTATTTTATAACTAAAATGTTGGGATTACCTTGTTTCTTTATACAGACCTCTCTCCCATAAGAATTGTCTTGCTATCTTTACTATCTTGCCAGGGTCTTATCACAACAACAGATGTAACAGATCTTGACTGAACACATAATTGTGCATTTTTTCTCTCATGTACATTATCTCTTGTATAGAGTTGTCACAGTGTGATTTCTtcacagaaaaacaaacaaaagctAATTACTTTATTGGAAGGATTTGGTAATGGATTCAATGGTATAATGATCTCAATGGGGTTGTAAATGAAAGATGCAGCATCAgcttttttaactctgcatttcaCTCACTGGTACCCTCAGTGTTGGAGACAAAGCTCATTTGGGGTTAATCATTTGTATGTTTTTCACCAGTGCTTAACTAAACTTGTTTGTGAGGCATTTGATTCTTGTACTGTGTATCTATAAAACTGTTCTCTTAATGTAACTCTGGTTTGCTCTGCGTTAGCCGTGCGAGTGACTACCTGTATAAACTGTTTTAGACTCGCTCAGGTTGACTTGACTGATTACTTGAAGGGAACTGTTTTTGCACTCTCACTGATATTAAATTGTGAATGAGCAATCCATAATTTTGTCATTTATACAATAAAATTAGTTTTCCTTTGTA

Function

NR:

description
erlin-2 isoform X1

GO: NA

KEGG:

id description
K23341 ERLIN; erlin

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036936159.1 False 2252 mRNA 0.43 12 66252344 66279256
XM_021621939.2 False 2345 mRNA 0.43 12 66252344 66279703
XM_021621940.2 True 2355 mRNA 0.43 12 66252344 66279789
Loading

Neighbor

gene id symbol gene type direction distance location
LOC110536255 LOC106580502 coding downstream 3907 66236548 ~ 66248437 (-)
LOC110536248 LOC106580495 coding downstream 208489 65940106 ~ 66043855 (-)
LOC100653466 LOC106580488 coding downstream 1138727 65104615 ~ 65113617 (-)
LOC110536236 LOC106580470 coding downstream 1549337 64672009 ~ 64703007 (-)
dgcr8 LOC106580468 coding downstream 1583430 64658998 ~ 64668914 (-)
LOC110536257 LOC106580503 coding upstream 16913 66296702 ~ 66300270 (-)
LOC110536259 LOC106580505 coding upstream 220633 66500422 ~ 66510614 (-)
trnag-ccc-3 NA coding upstream 231942 66511731 ~ 66511801 (-)
LOC110536260 LOC106580506 coding upstream 232072 66511861 ~ 66524096 (-)
rnf181 rnf181 coding upstream 285509 66565298 ~ 66572050 (-)
G1007316 NA non-coding downstream 43455 66199600 ~ 66208889 (-)
G1007362 NA non-coding downstream 80404 66167369 ~ 66171940 (-)
G1007361 NA non-coding downstream 85486 66166649 ~ 66166858 (-)
G1007359 NA non-coding downstream 87530 66164584 ~ 66164814 (-)
G1007357 NA non-coding downstream 89130 66162990 ~ 66163214 (-)
G1007481 NA non-coding upstream 67998 66347787 ~ 66349129 (-)
G1007504 NA non-coding upstream 89336 66369125 ~ 66369353 (-)
G1007523 NA non-coding upstream 101969 66381758 ~ 66381990 (-)
G1007549 NA non-coding upstream 125664 66405453 ~ 66405663 (-)
G1006106 NA other downstream 1152788 65098960 ~ 65099556 (-)
G1005628 LOC106580457 other downstream 1888567 64360764 ~ 64363777 (-)
G1004487 NA other downstream 2450342 63801529 ~ 63802002 (-)
LOC110536206 LOC106580443 other downstream 3506096 62740236 ~ 62804200 (-)
LOC110536201 LOC106580439 other downstream 3563022 62663428 ~ 62689389 (-)
G1007506 NA other upstream 92853 66372642 ~ 66372949 (-)
G1009720 NA other upstream 1691282 67971071 ~ 67971328 (-)
G1010443 NA other upstream 2407468 68687257 ~ 68687962 (-)
G1010922 NA other upstream 2836718 69116507 ~ 69119486 (-)
G1011014 NA other upstream 3025547 69305336 ~ 69306428 (-)

Expression

erlin2(erln2) Expression in all Baseline Samples

Bar chart with 20 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 50.
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erlin2(erln2) Expression in each Bioproject

Bar chart with 21 bars.
erlin2(erln2) Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 1500.
End of interactive chart.

Co-expression Network