XLOC_028450 (FP102892.1)



Basic Information


Item Value
gene id XLOC_028450
gene name FP102892.1
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007115.7
NCBI id CM002888.2
chromosome length 78093715
location 4514438 ~ 4516508 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00055221
GCTTGTCTGATGAGCCAGTGTTTGTCCTGAAAAGTGGTTCAAACGCTGTCAGATAAGCAAAAATAAACACCCAGTCAGTATATTGAAGACACTTGAGGTTTGTACCTTCCCATGTATGTTGAAGTTGGGGTCTCGTGGAGCTTTGAGGTCAGGAAAACTGCTGTCGTACTGCGGAGCGGCCGTCCAGGGCGAGTGTGGCGCCGGTGTGGACACCATCATGAAGAAAGGCCTGCGGTTTGACTTGTTTTCCAGGAAGTCGATGGAAACATTGGCCTGGATGGAATCAGACATGGATGAGCCACTAACTCGGGTAGATCATTCGCTGTTCTGTAATTTCATGAACACAAGATCTGCTCCTACCAGGACATCTGTAAGTTTTCTTACCAGGGCGAAC

Function


GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000097286

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00055221 True 394 lncRNA 0.48 2 4514438 4516508

Neighbor


gene id symbol gene type direction distance location
XLOC_028449 tbc1d30 coding downstream 6677 4484651 ~ 4507761 (-)
XLOC_028448 ntf3 coding downstream 82463 4397503 ~ 4431975 (-)
XLOC_028447 CU468826.3 coding downstream 127426 4376498 ~ 4387012 (-)
XLOC_028446 CU468826.1 coding downstream 139734 4321168 ~ 4374704 (-)
XLOC_028445 cd9b coding downstream 252765 4234994 ~ 4261673 (-)
XLOC_028451 zgc:194209 coding upstream 9740 4526248 ~ 4535189 (-)
XLOC_028452 rassf3 coding upstream 23715 4540223 ~ 4592287 (-)
XLOC_028453 CABZ01020840.1 coding upstream 85307 4601815 ~ 4612116 (-)
XLOC_028454 DGKI coding upstream 110286 4626794 ~ 4706893 (-)
XLOC_028455 creb3l2 coding upstream 195902 4712410 ~ 4751983 (-)
XLOC_028443 NA non-coding downstream 285283 4178834 ~ 4229155 (-)
XLOC_028444 NA non-coding downstream 303974 4207590 ~ 4210464 (-)
XLOC_028442 NA non-coding downstream 350562 4162825 ~ 4163876 (-)
XLOC_028441 NA non-coding downstream 356903 4147628 ~ 4157535 (-)
XLOC_028461 NA non-coding upstream 423959 4940467 ~ 4962892 (-)
XLOC_028462 NA non-coding upstream 446449 4962957 ~ 4967711 (-)
XLOC_028471 NA non-coding upstream 905238 5421746 ~ 5459469 (-)
XLOC_028472 NA non-coding upstream 911810 5428318 ~ 5441954 (-)
XLOC_028474 NA non-coding upstream 1028494 5545002 ~ 5553182 (-)

Expression



Co-expression Network