XLOC_028454 (DGKI)


Basic Information

Item Value
gene id XLOC_028454
gene name DGKI
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007115.7
NCBI id CM002888.2
chromosome length 78093715
location 4626794 ~ 4706893 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00055227
ATGATGGACCCCCTAGCCGACATGCGAGCGTCTCGGGCGGAGCGCAGCGGCAGAGGAGCCGCCGGTGGGGAATCGGCGGAAGATCAGACGCGCGGCTGCGGGAAAAACGCGGCGATGGGCGGCAGCGACAGCTTGAGCAGCTTCGCCGACATGGATGACTCGCTGGAGGATAAACTCAAAGGTCTGGCGttcaggaagcagatctcctaTAGGAAAGCCATCTCGCGCTCGGGCCTCCAGCATTTGGGTCCGGCCCAGAATCCCTTCCCTGCCTTGAGCAACGGACCAGCCAAGGAGCTCCGCAACACCGTGGACTGGAGTgAAAACGCAGTGAACGGTGATCATCTGTGGCTGGAGACCAACTGCTCCGGTGAACTCTGCTACCTGGGTGAAGAAACCTGTGTGGCCAAGATCGCAAAGTCTGCTCCCCGGAGGAAGTGTGCGGCCTGTAAGATCGTGGTTCACACCGCCTGCATCGAGGAGCTGGACAAGATCAACTTCCGCTGTAAACCCACTTTCAGAGAGGGCAGCTCTCGATGCCTCAGAGACAATGTGTTGCGGCACCACTGGGTTCATCGTCGCCGACAGGAGGGAAAATGTCGACAGTGCGGCAAAAGTTTTCCACAGAAGTTCTTCCACAGTAAGGAGATCGTGGCCATCAGCTGCTCCTGGTGCAAACAGGCGTTCCACAACAAGGTGACGTGTTTCATGCTGCATCAGATTGAGGAGCCCTGTTCACTGGGAGCTCACGCCGGGGTCATTGTCCCACCATCCTGGATTATTAAAGTCCGGAAACCGCAGAGCTCATTTAAAAACTCCACTCGGAGGAAAAAACGGACGTCGTTCAAAAGAAGAGCCAGCAAAAAGGGCACGGATGAATCTAAATGGCGTCCATTCATGCTGAAGCCGCTGCCGTCACCGCTGATGAAACCAGTGCTGGTGTTCGTCAACCCGAAAAGTGGAGGAAACCAGGGCACGAAGCTCCTGCAGATGTTCATGTGGATCCTGAACCCTCGGCAGGTGTTTGATTTGTCTCAGGGAGGCCCCAGAGATGCGTTGGAGTTGTACAGGAAAGTGCCAAATCTTCGCATCCTGGCCTGTGGAGGAGATGGAACCGTGGGCTGGATTCTGTCGGCTTTAGATGAGCTTCAGATGAACCCTCAGCCTCCTGTGGCGGTACTTCCTCTTGGAACAGGAAATGACCTTGCTAGGACACTCAACTGGGGAGGTGGCTACACAGACGAGCCGGTGTCGAAGGTGTTGTGTCATGTGGAGGACGGCTCTGTGGTCCAGCTGGACCGCTGGAATCTGCAGGTGGAGCGCTCAGTGGTCCAGCACGAGGAGGGAACACAGAAGCTTCCTTTAAATGTGTTCAATAACTACTTCAGCCTCGGTTTCGATGCCCACGTCACCCTGGAGTTTCACGAGTCCAGAGAAGCAAACCCAGAGAAATTCAACAGTCGCTTCCGTAACAAGATGTTCTATGCAGGGGCTGCGTTCTCAGACTTCCTCCAGAGGAGCTCCAGGGATCTGTCTAAGCATGTCCGAGTTGTGTGTGACGGCACCGATCTCACAGCCAAGATCCAGGAGCTCAAGTTTCAGTGCATCGTCTTCTTGAATATTCCCAGATACTGTGCTGGAACAATGCCATGGGGAAACACAGGAGACCACCGAGACTTTGAGCCACAGCGACATGATGATGGCTGCATCGAGGTCATCGGCTTCACCATGGCCTCTCTGGCGGCGCTGCAGGTTGGTGGTCATGGGGATCGTCTCCATCAGTGTCGAGAGGTGCTCATCACCACCTTCAAGACTCTGCCAGTGCAGGTAGATGGAGAGCCGTGCCGTCTGGCGCCCTCCACCCTGCGCATCTCTCTGAGGAACCAGGCCAACATGGTGCAGAAGAGCAAGAGACGCACATCTGTACCGCTGCTCAATGACCCTCACGCCGTTCCAGAGCGCCTGCGTCTGCGTGTCAACCGCATCGGTCTGCAGGACTACGACAGCATGCAGTTCGATAAGGAACGTCTGCGCGACATCTcgaCTGCTGTTGGCATCGTGGTGGTGAGAGGAGACTGTGACCTCGAAACCTGTCGACTCTACATTGATAGACTGCAGGAGGTGAGCACTTCCCATCATGCACCTGTATGTCTTATTTTACTGAGGCCTGTTAAGTCAGCGAGTGAATGTTGCACATAA

Function

symbol description
dgki Orthologous to human DGKI (diacylglycerol kinase iota).

GO: NA

KEGG: NA

ZFIN:

id description
ZDB-GENE-120327-1 Orthologous to human DGKI (diacylglycerol kinase iota).

Ensembl:

ensembl_id ENSDARG00000063578

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00055227 True 2199 mRNA 0.55 22 4626794 4706893

Neighbor

gene id symbol gene type direction distance location
XLOC_028453 CABZ01020840.1 coding downstream 14678 4601815 ~ 4612116 (-)
XLOC_028452 rassf3 coding downstream 34507 4540223 ~ 4592287 (-)
XLOC_028451 zgc:194209 coding downstream 91605 4526248 ~ 4535189 (-)
XLOC_028450 FP102892.1 coding downstream 110286 4514438 ~ 4516508 (-)
XLOC_028449 tbc1d30 coding downstream 119033 4484651 ~ 4507761 (-)
XLOC_028455 creb3l2 coding upstream 5517 4712410 ~ 4751983 (-)
XLOC_028456 ssbp1 coding upstream 45729 4752622 ~ 4756349 (-)
XLOC_028457 si:ch211-258f14.2 coding upstream 51108 4758001 ~ 4780667 (-)
XLOC_028458 zgc:162331 coding upstream 75828 4782721 ~ 4795205 (-)
XLOC_028459 coa6 coding upstream 125251 4832144 ~ 4834617 (-)
XLOC_028446 CU468826.1 non-coding downstream 252090 4321168 ~ 4374704 (-)
XLOC_028443 NA non-coding downstream 397639 4178834 ~ 4229155 (-)
XLOC_028444 NA non-coding downstream 416330 4207590 ~ 4210464 (-)
XLOC_028442 NA non-coding downstream 462918 4162825 ~ 4163876 (-)
XLOC_028461 NA non-coding upstream 233574 4940467 ~ 4962892 (-)
XLOC_028462 NA non-coding upstream 256064 4962957 ~ 4967711 (-)
XLOC_028471 NA non-coding upstream 714853 5421746 ~ 5459469 (-)
XLOC_028472 NA non-coding upstream 721425 5428318 ~ 5441954 (-)
XLOC_028474 NA non-coding upstream 838109 5545002 ~ 5553182 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000066_01479854_01525318 DGKI coding CI01000066 null 1479854 ~ 1525318 (+)