LOC110536312 (LOC106580582)


Basic Information

Item Value
gene id LOC110536312
gene name LOC106580582
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 69659414 ~ 69665129 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021622041.1
ttagagatgGCCATGTAAGGGACTATGGCACCCACTGCAGGCTTATTATAGGAGGGCAGAAGATAACATGGGCCATACATATAAACCCTCCCCACTAATCACACATAGTCCTGGACCAAGAGAGACATCGCACCACACACTGACATGGCCAGTAAGAAGGCTGCTaataagagacagagaggagcccAGAAGAGCTGCTCCAATGTCTTCTCCATGTTCGAACAGTCCCAGATACAGGAGTTTAAGGAGGCCTTCGGCTGTATTGACCAAGACAGAGATGGTGTCATCAAAAAACAGGATCTGAGGGAAACCTATGGACAGCTAGGAAAGTTGAACGTAAAGGATGAGGAGCTGGATGAGATGTTGAACGAGGGGAAGGGTCCCATCAACTTCACCGTTTTCCTCTCTTTGTTTGGGGAGAAACTCAATGGCACAGACCCTGAGGACACCATCCTCGCAGCCTTCAAGCTCTTTGACCCAAACGGCACAGGCTTCGTCAACAAGGATGAgtttagACGATTATTGATGAACCAGGCTGATAAATTCACAGCAGATGAGGTGGATCAGGCCTTCTCTGTGGCTCCAATTGACGTGGCCGGCAACATCGACTACAAGTCACTGTGTTACATCATTACACACGGAGACGAGAAGGAGGAGTCCTAAAGACCTTCTGACACCTGATAGGGCAGAACTGGAATCTCCTCTGTGCTCGTCTTTTGCCaatacattaaagacattttcaAAACTCAA

Function

NR:

description
PREDICTED: myosin regulatory light chain 2, atrial isoform-like

GO: NA

KEGG:

id description
K12754 MYL7; myosin regulatory light chain 7

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021622041.1 True 750 mRNA 0.48 7 69659414 69665129

Neighbor

gene id symbol gene type direction distance location
LOC110536308 LOC106580585 coding downstream 32324 69581843 ~ 69627090 (-)
LOC110535103 fgf10 coding downstream 85785 69559666 ~ 69573629 (-)
LOC110536307 paip1 coding downstream 103423 69544805 ~ 69555991 (-)
c11h5orf34 cssa20h5orf34 coding downstream 115016 69533784 ~ 69544398 (-)
LOC110536305 LOC106580587 coding downstream 127305 69521113 ~ 69532109 (-)
LOC110536311 LOC106580581 coding upstream 982 69666111 ~ 69674458 (-)
LOC110536316 aebp1 coding upstream 73065 69738194 ~ 69770129 (-)
LOC110536317 LOC106580578 coding upstream 126282 69791411 ~ 69805945 (-)
LOC110535106 LOC106580600 coding upstream 156402 69821531 ~ 69823285 (-)
LOC110536318 LOC106580577 coding upstream 182094 69847223 ~ 69892082 (-)
G1011588 NA non-coding downstream 20039 69639152 ~ 69639375 (-)
G1011587 NA non-coding downstream 24784 69634163 ~ 69634630 (-)
G1011250 NA non-coding downstream 106923 69457984 ~ 69552491 (-)
LOC110536304 LOC106585162 non-coding downstream 139138 69501897 ~ 69520334 (-)
G1011616 NA non-coding upstream 25764 69690893 ~ 69691189 (-)
G1011618 NA non-coding upstream 29395 69694524 ~ 69694733 (-)
G1011619 NA non-coding upstream 39168 69704297 ~ 69704962 (-)
G1011623 NA non-coding upstream 44557 69709686 ~ 69711373 (-)
G1011626 NA non-coding upstream 50322 69715451 ~ 69715670 (-)
G1011014 NA other downstream 352986 69305336 ~ 69306428 (-)
G1010922 NA other downstream 539928 69116507 ~ 69119486 (-)
G1010443 NA other downstream 971452 68687257 ~ 68687962 (-)
G1009720 NA other downstream 1688086 67971071 ~ 67971328 (-)
G1007506 NA other downstream 3286465 66372642 ~ 66372949 (-)
G1012814 NA other upstream 1219347 70884476 ~ 70890991 (-)
G1013669 NA other upstream 1832179 71497308 ~ 71515434 (-)
G1013960 NA other upstream 2330952 71996081 ~ 71996688 (-)
G1014411 NA other upstream 2694156 72359285 ~ 72359505 (-)
G1014639 NA other upstream 2781525 72446654 ~ 72449340 (-)

Expression


Co-expression Network