LOC110536311 (LOC106580581)


Basic Information

Item Value
gene id LOC110536311
gene name LOC106580581
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 69666111 ~ 69674458 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036936229.1
gagtaaTTTGTAAGGCTAGAAAAGATGCCGTGTGTCAGCTCCTACACGGGCCAGATGGGGAAGATGCCTTGTAACCTCAGCTCTGTGCTAGAGACAGCCCTCATGACTGCCCCGTGTTTGAGAAGAAATTATGGgtgGAGCAGATTCTGTCGGAGTTCAGGTTGAAGAAGGAGCAGTTGAAGGAGGTGatgaagaggatgatgagggagatGGACCGGGGACTGCGGGTAGAGACGCACCAGGAGTCCAGCGTCAAAATGCTACCCACCTATGTCTACTCCACTCCTGAGGGATCAGAGGTGGGGGATTTCCTGGCCCTGGACCTGGGGGGGACTAACTTCCGTGTGATGTTGGTGAAGgtgggggaggatgaggagagggggtggaaggTGGAGACCAAACACCAGATGTACTCCATCCCTGAAGACGCAATGACAGGCACGGCTGAGATGcTCTTTGACTACATTGCAGAGTGTATATCGGACTTCCTGGACAGACACCACATCAAACACAGGAAGCTTCCTCTGGGTTTCACCTTCTCCTTCCCCGTACGACATGAGGACATAGACAAGGGCATCCTACTGAACTGGACCAAAGGGTTCAAGGCTTCTGGAGCCGAGGGTAACAACGTGGTGGGACTACTGAGAGATGCCATcaagaggagagggGACTTTGAGATGGACGTAGTTGCCATGGTGAACGATACAGTTGCTACCATGATATCTTGCTACTATGAGGACCGCAGCTGCGAAGTGGGAATGATTGtggGTACTGGGTGTAACGCATGCTACATGGAGGAGATGAGGACAGTGGAGCtggtggagggagaagaggggaggatgtGTGTGAACACAGAGTGGGGGGCCTTCGGTGCCAACGGAGAGCTAGAGGAATTCAGACTGGAGTACGACAGGGTGGTGGATGAGACATCACTCAACCCTGGACAACAACTCTACGAGAAGTTGATCAGTGGGAAGTACATGGGAGAGCTGGTGAGGGTGGTATTGTTGAAGCTGGTGAATGAAGAGCTGCTGTTTAACGGGGAAGCCTCTGACCTGCTGAAGACTCGCGGCAGCTTTGAGACGCGCTATGTCTCCCAGATAGAGAGtgACTCTGGTGACAGGAAGCAGATCTACAACATCCTGTCCACGCTGGGCGTGTTGCCCTCGGAGATGGACTGTGACATAGTGCGTCTGGCGTGTGAGAGCGTGTCCACGCGGGCAGCACATATGTGTGGAGCGGGGTTAGCCGCCGTAATCAATCGCATGAGAGAACGCCGCAGCCAGGAGGTGCTGAAGATCACCGTGGGCGTTGACGGCTCCGTCTACAAACTCCACCCctgTTTCCAAGACAGGTTCCACAAAGTTGTACGTGAGCTGACGCCTCACTGTGACATCACCTTCATCCAATCAGAGGAAGGGAGTGGCCGGGGGGCAGCACTTATCTCTGCAGTAGCCTGTAAGATGGCAGCGTGCATGCTGACACAGTGAGAGGGTCGTAACAGCCTCCCACCTATAGGGGGTGATACAGGTGAACCAGGCTGAACTGAACCCCCACAGTAAATGACTCTGGAGAATCTCAATTGGTTTTGCTCAACTcgcatcctctcctccatcctcacctcgcctccttttgaaaaaggtcaacGGTAAtcgaggagaggaagggaggaaacATGGAAACAAATGACGTTTACAGAGGCGTAAAGTAGTAAAAACTAATGTAGCTAGTTGTGCtagacattttatagataaaacTACAAGTATTGTTTTGAAATATGTGCATGCTTTCTCCTCCAAGTGAACAACAGCTGAATCAAAGGGGGCAGATTTCAAAACTCTGCCGCGGAGGATGCGCTTCAGTATCCTTCGCGAGAGGAAGCTATAGAAGTGAGGAGGACACTCCTCTGTTCGCCTACAAACAAATTAACTCTCTCCTTGACCACTTATCGGTTTCCAGGTCGcacaggagaggaggacagaagagtCGAGGAGAGGATGGACTGTTGTCCAATTAAGAACCCCCTCCCATCTAATGTCACCCAACCCTTTTTTCGAGGCCCTCACAGAGTAAAGCATCCCTCCTCACTGGTGAGAGAGGGAATATATGTGTGGAGAA
>XM_036936228.1
GTCCTCATTCAACTGTATTTACAGTCCACTGGCTCTGCAGACTCACACTCTCCATACTCCctagatacacacagagagtaaTTTGTAAGGCTAGAAAAGATGCCGTGTGTCAGCTCCTACACGGGCCAGATGGGGAAGATGCCTTGTAACCTCAGCTCTGTGCTAGAGACAGCCCTCATGgtgGAGCAGATTCTGTCGGAGTTCAGGTTGAAGAAGGAGCAGTTGAAGGAGGTGatgaagaggatgatgagggagatGGACCGGGGACTGCGGGTAGAGACGCACCAGGAGTCCAGCGTCAAAATGCTACCCACCTATGTCTACTCCACTCCTGAGGGATCAGAGGTGGGGGATTTCCTGGCCCTGGACCTGGGGGGGACTAACTTCCGTGTGATGTTGGTGAAGgtgggggaggatgaggagagggggtggaaggTGGAGACCAAACACCAGATGTACTCCATCCCTGAAGACGCAATGACAGGCACGGCTGAGATGcTCTTTGACTACATTGCAGAGTGTATATCGGACTTCCTGGACAGACACCACATCAAACACAGGAAGCTTCCTCTGGGTTTCACCTTCTCCTTCCCCGTACGACATGAGGACATAGACAAGGGCATCCTACTGAACTGGACCAAAGGGTTCAAGGCTTCTGGAGCCGAGGGTAACAACGTGGTGGGACTACTGAGAGATGCCATcaagaggagagggGACTTTGAGATGGACGTAGTTGCCATGGTGAACGATACAGTTGCTACCATGATATCTTGCTACTATGAGGACCGCAGCTGCGAAGTGGGAATGATTGtggGTACTGGGTGTAACGCATGCTACATGGAGGAGATGAGGACAGTGGAGCtggtggagggagaagaggggaggatgtGTGTGAACACAGAGTGGGGGGCCTTCGGTGCCAACGGAGAGCTAGAGGAATTCAGACTGGAGTACGACAGGGTGGTGGATGAGACATCACTCAACCCTGGACAACAACTCTACGAGAAGTTGATCAGTGGGAAGTACATGGGAGAGCTGGTGAGGGTGGTATTGTTGAAGCTGGTGAATGAAGAGCTGCTGTTTAACGGGGAAGCCTCTGACCTGCTGAAGACTCGCGGCAGCTTTGAGACGCGCTATGTCTCCCAGATAGAGAGtgACTCTGGTGACAGGAAGCAGATCTACAACATCCTGTCCACGCTGGGCGTGTTGCCCTCGGAGATGGACTGTGACATAGTGCGTCTGGCGTGTGAGAGCGTGTCCACGCGGGCAGCACATATGTGTGGAGCGGGGTTAGCCGCCGTAATCAATCGCATGAGAGAACGCCGCAGCCAGGAGGTGCTGAAGATCACCGTGGGCGTTGACGGCTCCGTCTACAAACTCCACCCctgTTTCCAAGACAGGTTCCACAAAGTTGTACGTGAGCTGACGCCTCACTGTGACATCACCTTCATCCAATCAGAGGAAGGGAGTGGCCGGGGGGCAGCACTTATCTCTGCAGTAGCCTGTAAGATGGCAGCGTGCATGCTGACACAGTGAGAGGGTCGTAACAGCCTCCCACCTATAGGGGGTGATACAGGTGAACCAGGCTGAACTGAACCCCCACAGTAAATGACTCTGGAGAATCTCAATTGGTTTTGCTCAACTcgcatcctctcctccatcctcacctcgcctccttttgaaaaaggtcaacGGTAAtcgaggagaggaagggaggaaacATGGAAACAAATGACGTTTACAGAGGCGTAAAGTAGTAAAAACTAATGTAGCTAGTTGTGCtagacattttatagataaaacTACAAGTATTGTTTTGAAATATGTGCATGCTTTCTCCTCCAAGTGAACAACAGCTGAATCAAAGGGGGCAGATTTCAAAACTCTGCCGCGGAGGATGCGCTTCAGTATCCTTCGCGAGAGGAAGCTATAGAAGTGAGGAGGACACTCCTCTGTTCGCCTACAAACAAATTAACTCTCTCCTTGACCACTTATCGGTTTCCAGGTCGcacaggagaggaggacagaagagtCGAGGAGAGGATGGACTGTTGTCCAATTAAGAACCCCCTCCCATCTAATGTCACCCAACCCTTTTTTCGAGGCCCTCACAGAGTAAAGCATCCCTCCTCACTGGTGAGAGAGGGAATATATGTGTGGAGAA

Function

NR:

description
glucokinase-like

GO:

id name namespace
GO:0032024 positive regulation of insulin secretion biological_process
GO:0045721 negative regulation of gluconeogenesis biological_process
GO:0045725 positive regulation of glycogen biosynthetic process biological_process
GO:0046835 carbohydrate phosphorylation biological_process
GO:0051156 glucose 6-phosphate metabolic process biological_process
GO:0006096 glycolytic process biological_process
GO:0042593 glucose homeostasis biological_process
GO:0051594 detection of glucose biological_process
GO:0005524 ATP binding molecular_function
GO:0005536 glucose binding molecular_function
GO:0004340 glucokinase activity molecular_function

KEGG:

id description
K12407 GCK; glucokinase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036936229.1 False 2118 mRNA 0.52 11 69666111 69674383
XM_036936228.1 True 2164 mRNA 0.52 10 69666111 69674458

Neighbor

gene id symbol gene type direction distance location
LOC110536312 LOC106580582 coding downstream 982 69659414 ~ 69665129 (-)
LOC110536308 LOC106580585 coding downstream 39021 69581843 ~ 69627090 (-)
LOC110535103 fgf10 coding downstream 92482 69559666 ~ 69573629 (-)
LOC110536307 paip1 coding downstream 110120 69544805 ~ 69555991 (-)
c11h5orf34 cssa20h5orf34 coding downstream 121713 69533784 ~ 69544398 (-)
LOC110536316 aebp1 coding upstream 63736 69738194 ~ 69770129 (-)
LOC110536317 LOC106580578 coding upstream 116953 69791411 ~ 69805945 (-)
LOC110535106 LOC106580600 coding upstream 147073 69821531 ~ 69823285 (-)
LOC110536318 LOC106580577 coding upstream 172765 69847223 ~ 69892082 (-)
LOC110536320 LOC106585172 coding upstream 221158 69895616 ~ 69898166 (-)
G1011588 NA non-coding downstream 26736 69639152 ~ 69639375 (-)
G1011587 NA non-coding downstream 31481 69634163 ~ 69634630 (-)
LOC110536304 LOC106585162 non-coding downstream 145835 69501897 ~ 69520334 (-)
G1011243 NA non-coding downstream 177685 69487475 ~ 69488426 (-)
G1011616 NA non-coding upstream 16435 69690893 ~ 69691189 (-)
G1011618 NA non-coding upstream 20066 69694524 ~ 69694733 (-)
G1011619 NA non-coding upstream 29839 69704297 ~ 69704962 (-)
G1011623 NA non-coding upstream 35228 69709686 ~ 69711373 (-)
G1011626 NA non-coding upstream 40993 69715451 ~ 69715670 (-)
G1011014 NA other downstream 359683 69305336 ~ 69306428 (-)
G1010922 NA other downstream 546625 69116507 ~ 69119486 (-)
G1010443 NA other downstream 978149 68687257 ~ 68687962 (-)
G1009720 NA other downstream 1694783 67971071 ~ 67971328 (-)
G1007506 NA other downstream 3293162 66372642 ~ 66372949 (-)
G1012814 NA other upstream 1210018 70884476 ~ 70890991 (-)
G1013669 NA other upstream 1822850 71497308 ~ 71515434 (-)
G1013960 NA other upstream 2321623 71996081 ~ 71996688 (-)
G1014411 NA other upstream 2684827 72359285 ~ 72359505 (-)
G1014639 NA other upstream 2772196 72446654 ~ 72449340 (-)

Expression


Co-expression Network