LOC110536321 (LOC106580575)


Basic Information

Item Value
gene id LOC110536321
gene name LOC106580575
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 69898561 ~ 69903158 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021622055.2
GGGAGGGGCGAAAATTAAAGGGGCAAACAATGATATATTTAGCTGCCCATGGTCAATGCCTTCAACAACTCGAtaatttcaataaagcttttgtTTTTCATAGCAGTCAGAGCGCTCCGATTTGACAGCCCATTTTATCACGATTTATTTTAATGACAAACGACAGAAGTGCTGGGGACGCTGCTTGGGTGATGCATCATCAAATGCAGTCGAATCCCAAATCCGCCTGGCCCTCAAATTTCAACTCGGAAAATAATAACGTGAACTGGAATAACGCTATGGACGCTTCCCAATACCCTGGTTACTCCTCAAACTACTGGTATCCCCAGACACATTCCACAGCAGGGCACTATCCAAATGCCTACCCTTCAGGATCTGACGTACAGCCACCTTACAACCCACAGGCAATGCAAGCATATCCAAATGGCCACGGCGTCTATAACACTGGTCCAGGCCAATATCCGGCAAATTCTTTCCACCCATCCAACCCATTCTACTGTGCAGAGCAGATGTCTCCCAGGCAGGCAACAGGCCAGTACCCTAGCCAGGGCTGCCCAGGACCAGAGCAGAGCACAGGCGGGTCAGGACAACCCCACACCCAGCACCAACATCAGCACCACCACTACCCTGGACCGCACTGTCAAGGGGCCCCTAGCTATCCTCCTGGGTCTTACACACACTATGGGGAAGGTGGTCCTGCATTGCCTGCAAACCCCCAATACCCCACTGGACAGGCCCTTCACCCTAGGCCGCAGGCTGAGGCTTGGGCCCACTCGGGTGGGTATGGGCCCTCACACCAGCAGTGGCAGCCAGGCACCCAACCTCTACACAGCAACTATGGGAACCCTGTCCGCCCACAACACCCCCCAGCCTGGCCAGGCACTGGCACTGGAGCCCCACCCCCCTATGAAGCCAAGGACCAGCACTACCCAGGACCCCACCAGCACCAGTGTGCCCCACAGGTGGGACCCAAACCCAGACCAgccccctcccctaaccccactAATGGCAAGCCCGTCGACTTCAGCTCACCTCCCCAGATGTACAACAAACCAGGACGAGGGGGGGTGCAGGAGCCAAAGCCTTCCCAGGGTGAGCCTCCAACCCAGCCCCAGGGGCCAATCGGGCCCCAGTCCCTGAGCGACAACCCCAGCTTGGCCAAAGTCCAGCAGGTCATGGCCCGGGTGCTTTTGCTCCATGAGGATGTGGATGAGTTTGTGGGTAAAAAATCGGACAAGAGTTACCGATACCTGGAGGAACTGCTGACCAAGGAACTGCTGGTTCTGGACTCAGTGGAGACCCAGGGACAGGAAGTGGTCAGGCAGGCCCGGAAGGAGGCTGTGCAGAGGATCCAGGCCATCCTGGACCGGCTGGAGAAAAAGGCCTTCTGAATTGGACCGGTTCTGGTTCTAAGGGTCTTGCTGTTCTTTTTTTGTGACATTTGAATCTAAACCGGTCCCTTGGAATTAAATGCCCAATTCTCTGTTTGTTGACTACATCTCCTGGATCGTAAAGGTTTAGATAGACTGGTTCTCAACAAGGACTTTTGGTTTGGAATCAGGCCAGCTTATGCTACTTCACGCAGGTGTGATCAGGAACATAAGAGATGCCATGTCAAAGTATTCATGATGGCAAATGTAATGGTTGTACATATCAAGTCATGACTAAGTTATGGTGTTGTTGGGTTAGTTGTCATAACCCGACATTAGTGTCCATGATGGCTTAAAGCATCGGTTATGTCATGCTTGTGCCAGTGTAATGTAGTCTTATAATGGTGGTTTCATATAGTGTCACCATGTTCATTTCAAAGTAGGTAAATGTTGCCCCTTAATCACTGATAGGGTGAGATGTTTTTGCTTGGTTAATAAGGCTTGGATTTGGCATAggctaatctgatcctagatctgtgttcAAAGGCCACTTCTACCATGAGTGTTCCATTCACCATGTTTTCTTACATGTTATGAACCATTTGCACTACCATGAGATTTTCCCTTTATCACTCACCCCAACCTTATCACCCACCTGTCATTGTAAGCAGAATGCAAACAGTGTGCATTCACACACAGCCTTCCAAATTGCCGCAGGGATTTACATTAAGGGTTGCCCTATTGCCTTTGTCAAGTTAACTGGGCGGTTATGCAAGTTGAGCTTGCTCTGAGGTTGCTCCATTAGTCAGGTGATATGTTTTTAAAAAGTGAATACAACCAAACTGCAAAGAATTTCAATAGCCTAAAACTGATATCCCTTTAGGTGAAAGACAGGATTTATGGCAGTTGGGCAggtcacacttttttttttaaactgatttAAAAAAAGTGAAAGGCAGGCAATATGGCGCTTCTGCTTAATTTACATTTGAGCAAGTGATCATAATATTTGAGCAACCAAAAAAATCATCCTGACTTGCCTTTGTAGACTTTAATATCAATCCATAGGTGGGTAACGTTACACACACAGTATCTACAAAGGTAGAGTCAATTGCTTTTCAATGCGGTCGATGGAAGAAATTCAATTAATGACTTAAAGTTGCTCAATGGAAATATTGAGGAAGTTTCAATTCACTCCCTGAATAAATTAATGTTTTAATTCCATCTATCCTAACCCTGGTATGTATGTATAGTAGTTGGTCTACAACTCCTCCACAATGCTTTTGCCATTGATTGGTGTTAGACATTGTAATTAAGTGCAGGCCTAGGATCAGTTTAGTGTTATTCTTCGAAGGACGAAAAGGAAAACTGACCTTAGACCCTGTTCAATTACTTCCTTCTTTAGAGTAATCTCTGACCTTTCTACCACAGTTTTACCATTCAAGTTCATATCAGACCAGGACCCATATCCATAAATAGTCTCGGAATATGAGTGATGATCTAGTATCAGGTCCaccctgtccatataatcttattcattatgatctaaaaggctaaactgaacctagatcagcactcctacgtagaggctttgtggatacgggcccagtGATATTTTAAGGAAGAAGGATGTATTGAAACAGGTGGTTGGGGTCAGCTTCATCCTACAGCACTATGATTggatgtttatttatttctaaACCACAAATCAAATCACTTTCTTAGATTGTGTTAATTTCTTAGAAATCAGCTACTTTGTTgatcaaaataaataataataatcacgaGTGCCATAATATCGGCAGGTGCTTTTTCAAATCGTTATAAAAAATAAACTTTAAATCTCTTAAGCTTTGCATGGATCAAAATGTTCTGTTTGTCATGTTTCTTTTTTTCCTGTGATGTTATTTTTGTGTTCAGATAGAGAACCATTAGCTAACTAAAATATCTATATTTGTAACAGGGACCAAGGTCCTGTCTACAGCGGTTTCTGACGTAATGCATGTTTCCAACATAAGATGGGACTATTTTCCTGACTGATTCAGAAATGACTACAGCTCAAACATATGAATTGCATTAAATGTCAGTACATTTTTCAAATGTG

Function

NR:

description
BAG family molecular chaperone regulator 4-like

GO: NA

KEGG:

id description
K09558 BAG4; BCL2-associated athanogene 4

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021622055.2 True 3474 mRNA 0.45 5 69898561 69903158

Neighbor

gene id symbol gene type direction distance location
pold2 pold2 coding upstream 160171 69726767 ~ 69738390 (+)
sb:cb288 NA coding upstream 187150 69705334 ~ 69711411 (+)
LOC110536313 LOC106580580 coding upstream 193389 69696110 ~ 69705172 (+)
agpat9l LOC106580584 coding upstream 243494 69642089 ~ 69655067 (+)
LOC110536303 LOC106580590 coding upstream 413630 69471050 ~ 69484931 (+)
LOC110536323 LOC106580573 coding downstream 1828 69904948 ~ 69917078 (+)
rnf122 LOC106580572 coding downstream 14536 69917694 ~ 69936419 (+)
LOC110536326 LOC106580571 coding downstream 41504 69944662 ~ 69952653 (+)
LOC110536327 LOC106580570 coding downstream 53373 69956531 ~ 69971816 (+)
LOC110536329 LOC106580569 coding downstream 80020 69983168 ~ 69995816 (+)
G1011487 NA non-coding upstream 3901 69894280 ~ 69894660 (+)
G1011438 NA non-coding upstream 49938 69816355 ~ 69848623 (+)
G1011402 NA non-coding upstream 139947 69758114 ~ 69758614 (+)
G1011513 NA non-coding downstream 52138 69955296 ~ 69955531 (+)
G1011518 NA non-coding downstream 70719 69973877 ~ 69974104 (+)
G1011509 LOC106580568 non-coding downstream 71738 69974896 ~ 69976598 (+)
G1011519 NA non-coding downstream 74020 69977178 ~ 69977512 (+)
G1011336 NA other upstream 264685 69633501 ~ 69633876 (+)
LOC110536300 LOC106580593 other upstream 498327 69398535 ~ 69400234 (+)
LOC110535101 LOC106580561 other upstream 1073561 68687221 ~ 68847333 (+)
LOC110536291 LOC106580540 other upstream 1311519 68584627 ~ 68587134 (+)
LOC110536331 LOC106580567 other downstream 98311 70001416 ~ 70009325 (+)
G1011531 NA other downstream 115945 70019103 ~ 70019906 (+)
LOC110536338 LOC106580595 other downstream 226124 70128401 ~ 70134490 (+)
G1012975 NA other downstream 1141101 71044259 ~ 71044604 (+)

Expression


Co-expression Network