trnal-caa-21


Basic Information

Item Value
gene id trnal-caa-21
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 70051746 ~ 70051857 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>trnal-caa-21
gtcaggatggccgagtggtctaaggcgccagactcaagttctggtctccgattggaggcgagggttcaaatccctcttctgaca

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
trnal-caa-21 True 84 mRNA 0.56 2 70051746 70051857

Neighbor

gene id symbol gene type direction distance location
trnal-caa-20 NA coding upstream 352 70051283 ~ 70051394 (+)
trnal-caa-19 NA coding upstream 808 70050827 ~ 70050938 (+)
trnal-caa-18 NA coding upstream 1270 70050365 ~ 70050476 (+)
trnal-caa-17 NA coding upstream 1726 70049909 ~ 70050020 (+)
trnal-caa-16 NA coding upstream 2270 70049365 ~ 70049476 (+)
trnal-caa-22 NA coding downstream 342 70052199 ~ 70052310 (+)
trnal-caa-23 NA coding downstream 773 70052630 ~ 70052741 (+)
trnal-caa-24 NA coding downstream 1229 70053086 ~ 70053197 (+)
trnal-caa-25 NA coding downstream 1692 70053549 ~ 70053660 (+)
trnal-caa-26 NA coding downstream 2155 70054012 ~ 70054123 (+)
G1011528 NA non-coding upstream 36751 70014146 ~ 70014995 (+)
G1011526 NA non-coding upstream 52206 69999211 ~ 69999540 (+)
LOC110536329 LOC106580569 non-coding upstream 55943 69983168 ~ 69995816 (+)
G1011519 NA non-coding upstream 74234 69977178 ~ 69977512 (+)
G1011509 LOC106580568 non-coding upstream 75148 69974896 ~ 69976598 (+)
trnal-caa-28 NA non-coding downstream 5147 70056987 ~ 70057327 (+)
G1011540 NA non-coding downstream 5683 70057540 ~ 70062206 (+)
trnal-caa-99 NA non-coding downstream 39826 70091666 ~ 70091961 (+)
G1011550 NA non-coding downstream 44310 70096167 ~ 70096457 (+)
G1011551 NA non-coding downstream 48151 70100008 ~ 70124758 (+)
G1011531 NA other upstream 31840 70019103 ~ 70019906 (+)
LOC110536331 LOC106580567 other upstream 42421 70001416 ~ 70009325 (+)
LOC110536323 LOC106580573 other upstream 141499 69904948 ~ 69917078 (+)
sb:cb288 NA other upstream 340413 69705334 ~ 69711411 (+)
G1011336 NA other upstream 417870 69633501 ~ 69633876 (+)
LOC110536338 LOC106580595 other downstream 77425 70128401 ~ 70134490 (+)
G1012975 NA other downstream 992402 71044259 ~ 71044604 (+)
G1013375 LOC106580618 other downstream 1421569 71473426 ~ 71474631 (+)
LOC110536353 LOC106580623 other downstream 1743571 71738585 ~ 71797315 (+)
G1013617 NA other downstream 1786481 71838302 ~ 71840882 (+)

Expression


Co-expression Network