trnal-caa-34


Basic Information

Item Value
gene id trnal-caa-34
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 70060085 ~ 70060196 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>trnal-caa-34
gtcaggatggccgagtggtctaaggcgccagactcaagttctggtctccgattggaggcgagggttcaaatccctcttctgaca

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
trnal-caa-34 True 84 mRNA 0.56 2 70060085 70060196

Neighbor

gene id symbol gene type direction distance location
trnal-caa-33 NA coding upstream 328 70059646 ~ 70059757 (+)
trnal-caa-32 NA coding upstream 769 70059205 ~ 70059316 (+)
trnal-caa-31 NA coding upstream 1209 70058765 ~ 70058876 (+)
trnal-caa-30 NA coding upstream 1660 70058314 ~ 70058425 (+)
trnal-caa-29 NA coding upstream 2545 70057429 ~ 70057540 (+)
trnal-caa-35 NA coding downstream 330 70060526 ~ 70060637 (+)
trnal-caa-36 NA coding downstream 771 70060967 ~ 70061078 (+)
trnal-caa-37 NA coding downstream 1212 70061408 ~ 70061519 (+)
trnal-caa-38 NA coding downstream 1664 70061860 ~ 70062037 (+)
trnal-caa-39 NA coding downstream 2139 70062335 ~ 70062446 (+)
trnal-caa-28 NA non-coding upstream 2758 70056987 ~ 70057327 (+)
G1011528 NA non-coding upstream 45090 70014146 ~ 70014995 (+)
G1011526 NA non-coding upstream 60545 69999211 ~ 69999540 (+)
LOC110536329 LOC106580569 non-coding upstream 64282 69983168 ~ 69995816 (+)
G1011519 NA non-coding upstream 82573 69977178 ~ 69977512 (+)
trnal-caa-99 NA non-coding downstream 31487 70091666 ~ 70091961 (+)
G1011550 NA non-coding downstream 35971 70096167 ~ 70096457 (+)
G1011551 NA non-coding downstream 39812 70100008 ~ 70124758 (+)
LOC110536338 LOC106580595 non-coding downstream 68300 70128401 ~ 70134490 (+)
G1011797 NA non-coding downstream 87062 70147258 ~ 70147459 (+)
G1011531 NA other upstream 40179 70019103 ~ 70019906 (+)
LOC110536331 LOC106580567 other upstream 50760 70001416 ~ 70009325 (+)
LOC110536323 LOC106580573 other upstream 149838 69904948 ~ 69917078 (+)
sb:cb288 NA other upstream 348752 69705334 ~ 69711411 (+)
G1011336 NA other upstream 426209 69633501 ~ 69633876 (+)
G1012975 NA other downstream 984063 71044259 ~ 71044604 (+)
G1013375 LOC106580618 other downstream 1413230 71473426 ~ 71474631 (+)
LOC110536353 LOC106580623 other downstream 1735232 71738585 ~ 71797315 (+)
G1013617 NA other downstream 1778142 71838302 ~ 71840882 (+)

Expression


Co-expression Network