trnal-caa-41


Basic Information

Item Value
gene id trnal-caa-41
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 70063228 ~ 70063339 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>trnal-caa-41
gtcaggatggccgagtggtctaaggcgccagactcaagttctggtcacCGATTGGAGgtgagggttcaaatccctcttctgaca

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
trnal-caa-41 True 84 mRNA 0.55 2 70063228 70063339

Neighbor

gene id symbol gene type direction distance location
trnal-caa-40 NA coding upstream 330 70062787 ~ 70062898 (+)
trnal-caa-39 NA coding upstream 782 70062335 ~ 70062446 (+)
trnal-caa-38 NA coding upstream 1191 70061860 ~ 70062037 (+)
trnal-caa-37 NA coding upstream 1709 70061408 ~ 70061519 (+)
trnal-caa-36 NA coding upstream 2150 70060967 ~ 70061078 (+)
trnal-caa-42 NA coding downstream 639 70063978 ~ 70064089 (+)
trnal-caa-43 NA coding downstream 1101 70064440 ~ 70064551 (+)
trnal-caa-44 NA coding downstream 1847 70065186 ~ 70065297 (+)
trnal-caa-45 NA coding downstream 2309 70065648 ~ 70065759 (+)
trnal-caa-46 NA coding downstream 2760 70066099 ~ 70066210 (+)
G1011540 NA non-coding upstream 1022 70057540 ~ 70062206 (+)
trnal-caa-28 NA non-coding upstream 5901 70056987 ~ 70057327 (+)
G1011528 NA non-coding upstream 48233 70014146 ~ 70014995 (+)
G1011526 NA non-coding upstream 63688 69999211 ~ 69999540 (+)
LOC110536329 LOC106580569 non-coding upstream 67425 69983168 ~ 69995816 (+)
trnal-caa-99 NA non-coding downstream 28344 70091666 ~ 70091961 (+)
G1011550 NA non-coding downstream 32828 70096167 ~ 70096457 (+)
G1011551 NA non-coding downstream 36669 70100008 ~ 70124758 (+)
LOC110536338 LOC106580595 non-coding downstream 65157 70128401 ~ 70134490 (+)
G1011797 NA non-coding downstream 83919 70147258 ~ 70147459 (+)
G1011531 NA other upstream 43322 70019103 ~ 70019906 (+)
LOC110536331 LOC106580567 other upstream 53903 70001416 ~ 70009325 (+)
LOC110536323 LOC106580573 other upstream 152981 69904948 ~ 69917078 (+)
sb:cb288 NA other upstream 351895 69705334 ~ 69711411 (+)
G1011336 NA other upstream 429352 69633501 ~ 69633876 (+)
G1012975 NA other downstream 980920 71044259 ~ 71044604 (+)
G1013375 LOC106580618 other downstream 1410087 71473426 ~ 71474631 (+)
LOC110536353 LOC106580623 other downstream 1732089 71738585 ~ 71797315 (+)
G1013617 NA other downstream 1774999 71838302 ~ 71840882 (+)

Expression


Co-expression Network