trnal-caa-102


Basic Information

Item Value
gene id trnal-caa-102
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 70093031 ~ 70093142 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>trnal-caa-102
GTCAGGATGGCcaagtggtctaaggcgccagactcaagttctggtctccgattggaggcgagggttcaaatcccttttctgaca

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
trnal-caa-102 True 84 mRNA 0.54 2 70093031 70093142

Neighbor

gene id symbol gene type direction distance location
trnal-caa-101 NA coding upstream 360 70092560 ~ 70092671 (+)
trnal-caa-100 NA coding upstream 813 70092107 ~ 70092218 (+)
trnal-caa-99 NA coding upstream 1254 70091666 ~ 70091961 (+)
trnal-caa-98 NA coding upstream 1715 70091205 ~ 70091316 (+)
trnal-caa-97 NA coding upstream 2167 70090753 ~ 70090864 (+)
trnal-caa-103 NA coding downstream 1233 70094375 ~ 70094486 (+)
trnal-caa-104 NA coding downstream 1689 70094831 ~ 70094942 (+)
LOC110536338 LOC106580595 coding downstream 35259 70128401 ~ 70134490 (+)
LOC110536339 nim1k coding downstream 52947 70146089 ~ 70167439 (+)
LOC110536340 LOC106580597 coding downstream 81789 70174931 ~ 70181550 (+)
G1011540 NA non-coding upstream 30825 70057540 ~ 70062206 (+)
trnal-caa-28 NA non-coding upstream 35704 70056987 ~ 70057327 (+)
G1011528 NA non-coding upstream 78036 70014146 ~ 70014995 (+)
G1011526 NA non-coding upstream 93491 69999211 ~ 69999540 (+)
G1011550 NA non-coding downstream 3025 70096167 ~ 70096457 (+)
G1011551 NA non-coding downstream 6866 70100008 ~ 70124758 (+)
G1011797 NA non-coding downstream 54116 70147258 ~ 70147459 (+)
G1011802 NA non-coding downstream 58138 70151280 ~ 70151486 (+)
G1011531 NA other upstream 73125 70019103 ~ 70019906 (+)
LOC110536331 LOC106580567 other upstream 83706 70001416 ~ 70009325 (+)
LOC110536323 LOC106580573 other upstream 182784 69904948 ~ 69917078 (+)
sb:cb288 NA other upstream 381698 69705334 ~ 69711411 (+)
G1011336 NA other upstream 459155 69633501 ~ 69633876 (+)
G1012975 NA other downstream 951117 71044259 ~ 71044604 (+)
G1013375 LOC106580618 other downstream 1380284 71473426 ~ 71474631 (+)
LOC110536353 LOC106580623 other downstream 1702286 71738585 ~ 71797315 (+)
G1013617 NA other downstream 1745196 71838302 ~ 71840882 (+)

Expression


Co-expression Network