Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110536341 |
| gene name | ga45g |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048575.1 |
| NCBI id | CM023229.2 |
| chromosome length | 86280908 |
| location | 70184201 ~ 70186238 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| growth arrest and DNA damage-inducible protein GADD45 gamma-like |
| id | name | namespace |
|---|---|---|
| GO:0051726 | regulation of cell cycle | biological_process |
| GO:0006950 | response to stress | biological_process |
| GO:0005634 | nucleus | cellular_component |
| id | description |
|---|---|
| K04402 | GADD45; growth arrest and DNA-damage-inducible protein |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_021622082.2 | True | 1569 | mRNA | 0.45 | 4 | 70184201 | 70186238 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110536340 | LOC106580597 | coding | upstream | 2651 | 70174931 ~ 70181550 (+) |
| LOC110536339 | nim1k | coding | upstream | 16762 | 70146089 ~ 70167439 (+) |
| LOC110536338 | LOC106580595 | coding | upstream | 49711 | 70128401 ~ 70134490 (+) |
| trnal-caa-104 | NA | coding | upstream | 89259 | 70094831 ~ 70094942 (+) |
| trnal-caa-103 | NA | coding | upstream | 89715 | 70094375 ~ 70094486 (+) |
| prxl2c | aaed1 | coding | downstream | 1200530 | 71386768 ~ 71388869 (+) |
| LOC110536343 | cdc14b | coding | downstream | 1202941 | 71389179 ~ 71407898 (+) |
| LOC110536345 | znf367 | coding | downstream | 1236731 | 71422969 ~ 71429703 (+) |
| LOC110536350 | NA | coding | downstream | 1321116 | 71507354 ~ 71515429 (+) |
| LOC110535107 | LOC106580620 | coding | downstream | 1450989 | 71637227 ~ 71737202 (+) |
| G1011803 | NA | non-coding | upstream | 31366 | 70152579 ~ 70152835 (+) |
| G1011802 | NA | non-coding | upstream | 32715 | 70151280 ~ 70151486 (+) |
| G1011797 | NA | non-coding | upstream | 36742 | 70147258 ~ 70147459 (+) |
| G1011551 | NA | non-coding | upstream | 59443 | 70100008 ~ 70124758 (+) |
| G1011839 | NA | non-coding | downstream | 28946 | 70215184 ~ 70215424 (+) |
| G1011911 | NA | non-coding | downstream | 46814 | 70233052 ~ 70233506 (+) |
| G1011926 | NA | non-coding | downstream | 59212 | 70245450 ~ 70245773 (+) |
| G1011935 | NA | non-coding | downstream | 68831 | 70255069 ~ 70255325 (+) |
| G1011979 | NA | non-coding | downstream | 100506 | 70286744 ~ 70286963 (+) |
| G1011531 | NA | other | upstream | 164295 | 70019103 ~ 70019906 (+) |
| LOC110536331 | LOC106580567 | other | upstream | 174876 | 70001416 ~ 70009325 (+) |
| LOC110536323 | LOC106580573 | other | upstream | 273954 | 69904948 ~ 69917078 (+) |
| sb:cb288 | NA | other | upstream | 472868 | 69705334 ~ 69711411 (+) |
| G1012975 | NA | other | downstream | 858021 | 71044259 ~ 71044604 (+) |
| G1013375 | LOC106580618 | other | downstream | 1287188 | 71473426 ~ 71474631 (+) |
| LOC110536353 | LOC106580623 | other | downstream | 1609190 | 71738585 ~ 71797315 (+) |
| G1013617 | NA | other | downstream | 1652100 | 71838302 ~ 71840882 (+) |
| G1013922 | NA | other | downstream | 1693058 | 71879296 ~ 71879672 (+) |
