LOC110536345 (znf367)


Basic Information

Item Value
gene id LOC110536345
gene name znf367
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 71422969 ~ 71429703 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021622090.2
ATGTTCCGATGATGACCATTGGTTACTGTGTTGCGCTCGTTCGGGTTTACCTCATGCTTTGGCTCTTATAATAGGTTATTTCCCATACATGTGGTAAAAGGATTTATGAACCGCCCAGGCGCGATTTGCAACGCGGGAAATACTTGCAAAAATAGGAGCAGACATTGTATCCACATTGACAGTGTGAACACAATTTTTGTAAATTCATGAATTTTTGTGCCATATTTTTATAAGGAATTGTGGCACGGTTTTCTTCGTCTTTGGAAATGAATCCTATTTTCACTCCTGATTGAATAGCTGAATTTTGTGGGACACTTTCGGTCTTATAGCTGCCGAACCCAACTTTTTGCTAAAGTCAGGTTACGTGATAGCAAAGCTGGGTAAATAGCTTTTTCTTCAGATGGCAAGTGATTCCTGAGCATTGTGATACAATTTGAGATTTGATCAGCTTTTGACACATTCGTCTTTCATCTCAACGATGGCCGAGAACAAGCATCCTCAAGTTATTTTTTGCAACGACTCTCCAAAGAGAGTCCTGGTGTCTGTGATCAAAACCACCCCGATCAAGCCCAGGAAGAACGAATCTCTGATAGCGACCAGCCCTGGATTCAGCGACTTCATGGTGTACCCGTGGAAGTGGGGGGAGAACGCCCATAATGTGAGCCTGAGCCCGGGCTCGGTAAACGGGGCTGCCTCCCCTACCGGGACCAACACCGCCAGCGAGGCGGACATGGGTGCCTCCCATGACCAGATGAAGGACAGTAAAGAGGACGCTATTCGGCGTGGCCGCCCGCGTGCTGACACTGTCCGTGAGTTGATTAACGAGGGGGAGAGTTCCTCCAGCCGCATCCGCTGTAACATCTGCAACCGTGTGTTTCCTAGAGAGAAATCCCTACAGGCccacaagagaacacacacagGGGAGAGGCCTTACCCGTGTGACTATCCTGACTGTGGCAAGGCTTTTGTCCAGAGTGGCCAGCTAAAGACTCACCAGCGCCTTCACACCGGAGAGAAGCCCTTTGTCTGCTCTGAGAAAGCCTGCGGGAGTCGCTTTACCCATGCTAACCGGCACTGCCCAAAGCACCCATATGCCCGTTTGAAGAGAGAAGACCCCAAGGAGGGACCAAACAAGGCCCAGTCTGTAGACAACAAGGCTGTGGCAGAGTGGCTGGCAAAGTACTGGCAGACCCGTGAGCAGCGTGCCCCTGTGCCCACCAAGGGGAAACCCCAGGGCAAGGGCGGGGTGGAGGACCAGGAGCAGCAGGACCCCCGGGAGTTTCTCCAAtcagatgaggaggaagaggaggagccaaTGGAGGAAGAGAAGTGCAACGGGGGTGGGGCTGCCAAACGGAGTCTCCAAGAGCAACGGGAGCGTCTCCATGGTGCCCTGGCGCTCATTGAGCTGGCTAACAACCTGTCTGCCTGAAACCCTACCCATATCCCAGTGTTGAAACCCTCCCCAGTCACTCCCCTTCTGCCCCCTGCACAATGTGTTCTGGGTAGAATTTGTCTGTAGGGAAACATCTAGGATAAGCTTACCCTCCCCAAATACTTAACCATTAATGGGGGGAAATTCTAAGCGGAACTTAGATCAGTATCTGGGGTTCTTCTCCGTGTGCAGTGTGGGGCAGGCACAAGCTAAAAGCACCTTATCCAGCTTCCAATTGTATCCTTATTAGGCTGCTAAGATTGTAGATcacaggtggctggtggcaccttagttggggaggacgggctcataataatggctggaatgcaaTAAATGGAACATTCCATTCTctacattccagccattattatgagcctcccctcaccagcctcctgtgttgTAGATGTCAATATATGAAGAATGTTTCACTTTCCTCTGCCTTCTAAAGACTGGAGGAGATGACCTTTTAATGTTTAGTTTGTTTTGTTTGCACTTTGGTGGTAACGAGTTATTTGTTGTGTCTTTTACTTTTGACGATAAAGTATATTGTGTGAGTATGTTTATATAATGGAAGTCTATGTAGATTTAGCTCAGATGGATGGAGTGATACAGGGTGTGGTCAGTCATAGGACCGTTTAGGTGTATCTAAATACTGGAAAGTGGATTCCTCTCCTGATTCTCTGATCTGGACTGTGACACGATAGGTGAAAAAGCAATGTGGTGGAAGCCTATCAGGGGATTTCGCTTCCACCTGTAGTTCTTTCAGATCAGTGCAGGTGAAGGAGAGTAGATGAGGGGAGGAAGTCACTGtagagactattgagatgcaaccCATTGCAAGCCTAATCTACAGTAGTGGCTAGCCACAAGCTTTCACAAAAATGCAAGCTCCAACCCCTTCACCTATTAAATGTATCACACCTAGAACTGTAGCTATAACCCTGGAGGGACAACTCTTGTCCTGGAGAGCCGCAGAGTGAGCAGCCGCAGCTCCATATCAGCCCTTAACAAACCTGATCTAGATGATCATCTTATCACGGGGATTTAGACCACAGTTAGTTGGGTCAGgtgtgttagagctgggctggaacaaaagcctgcccaTGCTATGGCTGTGCAGGCCTGGCGTTGGCCTTCTCCATTCTAACCAAATTACATGGCCAGACATACGGAAGAGGAGTATTTAAAGTCATTAGTGTCGCCACCTTTTATATTAAAAGATGCTGGCTGATTGGAGATACGGACTTGTAGCCCCATTGGTGGTGTATGTACAAGCCTTCTCTATAATAAACATTTCATAGGTATTTATTTCATCATGTTTTTTTGTCCTTTTTGTTAACGATCTGCTATCACAAGCTGTCTCCAAGTACTGACATATAGTTCCATTGAAGAATATATTGATCATCGCCTCCCTAAAATTATTTAGTATCTATCGACGTCAACTTCTAGCCGTTAGAATTGTACTCCCCTTTGCAGCAGCAcgtgtatctacagtatctgcTACTAAGTTTTGCATTTATGGATTAAGCTTGCAATGTAACATGTTTCCACCTATTAGACCAGTCTAAATAAATGGGACATGTTTCCACCTATTAGACCAGTTTAGAGAAATGGGACATGTTAGACCAGTCTAAAGAAATGTGACATGTTTCCACCTATTAGACCAGTCTAGAGAAATGGGACATGTTAGACCAGTCTAGAGAAATGGGACATGTTAGACCAGTCTAAAGAAATGGGACATGTTTCCACCTATTAGACCAGTTTAGAGAAATGGGACATGTTAGACCAGTCTATAGAAATGGGACATGTTGGACCAGTCTAAAGAAATGGGACATGTTTCCACCTATTAGACCAGTTTAGAGAAATGGGACATGTTAGACCAGTCTAAAGAAATGGGACATGTTTCCACCTATTAGACCAGTCTAGAGAAATGGGACATGTTAGACCAGTCTAGAGAAATTGGTCATGTTAGACCAGTCTAGATAAATGGGACATGTTTCCACCTATTAGACCAGTCTAGAGAAATGGGACATGTTAGACCAGTCTAGAGAAATGGGACATGTTTCCACCTATCAGACCAGTTTAGAGAAATGGGACATGTTTCCACCTATTAGACCAGTCTAGAGAAATGGGACATGTTTCTACCTATTAGACCAGTCTAGAGAAATGGGACATGTTTCCACCTATTAGACCAGTCTAGAGAATTGGGACATGTTTCCACCTATTAGACCAGTCTAGAGAAATGGGACATGTTTCCACCTATTAGAACAGTCTAGAGAAATGAGACATGTTTCTACCTATTAGACCCGTCTAGAGAATTGGGACATGTTTCCACCTATTAGACCAGTCTAGAGAAATGGGACATGTTTCCACCTATTAGACCAGTCTAGAGAAATGGGACATGTTTCTACCTATTAGACCAGTCTAGAGAAATGGGACATGTTAGACCAGTCTAGAGAAATGGGACATGTTTCTACCTACTAGACCAGTCTAGAGAAATGGGACATGTTAGACCAGTCTAGAGAAATGGGACATGTTAGACCAGTCTAGAGAAATGGGACATGTTAGACCAGTCTAGAGAAATGGGACATGTTTCTGCCTATTAGACCAGTCTAGTGAAATGGGACATGTTAGACCAGTCTAGAGAAATGGGACATGTTAGACCAGTCTAGAGAAATGGGACATGTTTCTACCTATTAGACCAGTCTAGAGAAATGGGACATGTTTCTACCTATTAGACCAGTCTAGAGAAATGGGACATGTTAGACCAGTCTAGAGAAATGGGACATGTTTCTACCTATTAGACCAGTCTAGAGAAATGGGACATGTTTCTACCTATTAGACCAGTCTAGAGAAATGGGACATGTTAGACCAGTCTCGAGAAATGGGACATGTTTATACCTATTAGACCAGTCTAGAGAAATGGGACATGTTAGACCAGTCTAGAGAAATGGGACATGTTTCTACCTATTAGTCCAGTCTAGAGAAATGGGACATGTTTGACCAGTCTAGAGAAATGGGACATGTTAGACCAGTCTAGAGAATTGGGACATGTTTCTACCTATTAGACCAGTCTAGAGAAATGGGACATGTTAGACCAGTCTAGAGAAATGGGACAAATTAGACCAGTCTAGAGAAATGGGACATGTTTCTACCTATTAGACCAGTCTAGAGAAATGGGACATGTTAGACCAGTCTAGAGAAATTGGACATGTTAGACCAGTCTAGAGAAATGGGACATGTTTCTACCTATTAGACCAGTCTAGAGAAATGGGACATGTTAGACCAGTCTAGAGAAATGGGACATGTTAGACCAGTCTAGAGAAATGGGACATGTTTCCACCTATTAGACCAGTCTAGAGAAATGGGACATGTTAGACCAGTCTAGAGAAATGGGACATGTTAGACCAGTCTAGAGAAATTGGACATGTTTCCACCTATTAGACCAGTCTAGAGAAATGGGACATGTTAGACCAGTCTAGAGAAATGGGACATGTTAGACCAGTCTAGAGAAATTGGACATGTTTCCACCTATTAGACCAGTCTAGAGAAATGGGACATGTTAGACCAGTCTAGAGAAATGGGACATGTTAGACCAGTATAGAGAAATGGGACATGTTTCTACATAAAGGAGGGTGTAATGAATGCTTGGCATTTGcaatgttttattatttgttaGCAACACTACATCTCTTAACATTGTGTAAATTGCCAattgtttttatatatatgtttttgttgttttcatTAGGTTTGTGCTTCCTGCAACACCCAGATGCTTTGTTGGCCATATGTGATTAAGTGTtgtatcccactgggcacatactggttgaatcaacgttgtttccaaggCATAAAAAAAACGATGTTATGA

Function

symbol description
znf367 Predicted to enable DNA-binding transcription factor activity and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Predicted to be involved in regulation of transcription by RNA polymerase II. Predicted to be located in nucleus. Is expressed in brain; optic tectum; and retina. Orthologous to human ZNF367 (zinc finger protein 367).

NR:

description
zinc finger protein 367

GO:

id name namespace
GO:0046872 metal ion binding molecular_function
GO:0003676 nucleic acid binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021622090.2 True 5309 mRNA 0.44 5 71422969 71429703

Neighbor

gene id symbol gene type direction distance location
LOC110536343 cdc14b coding upstream 15074 71389179 ~ 71407898 (+)
prxl2c aaed1 coding upstream 34100 71386768 ~ 71388869 (+)
LOC110536341 ga45g coding upstream 1236731 70184201 ~ 70186238 (+)
LOC110536340 LOC106580597 coding upstream 1241419 70174931 ~ 70181550 (+)
LOC110536339 nim1k coding upstream 1255530 70146089 ~ 70167439 (+)
LOC110536350 NA coding downstream 77651 71507354 ~ 71515429 (+)
LOC110535107 LOC106580620 coding downstream 207524 71637227 ~ 71737202 (+)
LOC110536353 LOC106580623 coding downstream 308882 71738585 ~ 71797315 (+)
LOC110536646 NA coding downstream 396201 71825904 ~ 71826891 (+)
LOC110536356 LOC106580708 coding downstream 417228 71846931 ~ 71851497 (+)
G1013353 NA non-coding upstream 8097 71414645 ~ 71414872 (+)
G1013345 NA non-coding upstream 39864 71382217 ~ 71383105 (+)
G1013335 NA non-coding upstream 58916 71363848 ~ 71364053 (+)
G1013315 NA non-coding upstream 72520 71350088 ~ 71350449 (+)
G1013389 NA non-coding downstream 62989 71492692 ~ 71494766 (+)
G1013472 NA non-coding downstream 178079 71607782 ~ 71608052 (+)
G1013476 NA non-coding downstream 183329 71613032 ~ 71613352 (+)
G1013478 NA non-coding downstream 187333 71617036 ~ 71617242 (+)
G1013479 NA non-coding downstream 188068 71617771 ~ 71617995 (+)
G1012975 NA other upstream 378365 71044259 ~ 71044604 (+)
LOC110536338 LOC106580595 other upstream 1292118 70128401 ~ 70134490 (+)
G1011531 NA other upstream 1403063 70019103 ~ 70019906 (+)
LOC110536331 LOC106580567 other upstream 1413644 70001416 ~ 70009325 (+)
LOC110536323 LOC106580573 other upstream 1512722 69904948 ~ 69917078 (+)
G1013375 LOC106580618 other downstream 43723 71473426 ~ 71474631 (+)
G1013617 NA other downstream 408635 71838302 ~ 71840882 (+)
G1013922 NA other downstream 449593 71879296 ~ 71879672 (+)
G1014834 NA other downstream 1330818 72760521 ~ 72760945 (+)

Expression


Co-expression Network