LOC110536346 (slc35d2)


Basic Information

Item Value
gene id LOC110536346
gene name slc35d2
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 71431838 ~ 71442390 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021622091.2
CTAATAACACTTCCTCCACACGATCGTGACAAAGCCAACGTGAAAGCAGCGGAGATCATTTCACATGTTGACGATTACAACTATTCTTGAAGTAATGTCTACCTCAGCTAACTTGCCAGAAGCCGAACATTCCGGGTTGTTGAAGTTTCTCTCTGCTGCGTTCTACGCCGTCAGTTCATTCTTGATCATTGTTGTTAACAAAACGATTCTCACAAACTACAGATTTCCCTCGTACATGTTTCTAGGAATTGGACAGATGGCCACTACAATCATCATTCTCTATGCTGCTAAAATTAACCAAACAGTTCACTTTCAAGACTTTGACAGAAGCATTTTCATCAAAATCTTCCCTCTACCTCTGCTGTATGTTGGAAACCACATAACAGGACTGGCGGGTACAAAGAAGTTAAGTTTACCCATGTTCACAGTCTTAAGGAAGTTCACCATATTGATGACAATGATCATGGAAGCAAGGATATTGAAAAAAAAAATCCCTAGTCGTCTGATCTACAGTGTTTTGGCCATCGTTTTTGGAGCATTGGTGGCAGCAAGCTCCGACTTGGCCTTTGATGCCGAGGGCTACACATTCATTCTGCTTAATGATGTCTTCACTGCTGCCAGTGGTGTGTACACCAAGAAGAAATTGGGAACTGAGggtctTGGAAAATATGGGATCTTATTTTACAATGCATTCATCATTTTCATTCCAACTCTTTTGGCTAGTGCTTTCACTGGGGATTTACACAAGGCCATTACATATGAACACTGGTTGAACACCCCCTTTGTTTCTTGCTTCCTTATGTCCTGCATCATGGGGTTTGTGCTGATGTATTCAATAGTGCTGTGTAGCCACTACAACTCAGCACTCACCACCACAGTGGTGGGAGCAATTAAGAATGTTGCTGTGGCCTACATCGGTATGTTTTTAGGTGGAGATTACCTCTTTTCATGGACAAACTTCCTGGGCTTGAATATTTGTATATCAGGGGGACTTGTGTATTCCTACCTGACGTTCCACAGCAGCAGCAAACCATCCCAATGCAATGGAAGCAGAATCCAGAAAAAACAGGATCAGCTGAAGATTCCCATTATGGAAGATTCCACAGACAGACTCCTTGTAAAATAagttatctttatttaaccttttattttatcagggtcccattgagaccaaggcctcttttTCAAGGGAGCTCTGCGTGAACACAATTTGTAAGTGAATACACCTGCGATACAACTGGTCATGATGCCATAGTTTATTTTCTGTACTCTAAGCACAACCCTTTGTAACTGCTCCATATTGTAGCGGACGTTCTTACATTTGATGTTTTAATGTAACTTTATGAAAAATTATGATCATACTTTTGACAATGTTTATTATTTGTGTTGCAAGTTGAAACCTGTAATTTTACTTGTGTTGTCAAGACAAGTGGtgttatactatacatacatactaGTACATGTGTAAATAGCAATGGCCACCAGTGGTTACTAAGCAACCCGTGAAACCAATGTGTGTACtgagagacatactgtagtgtattgaGCTGTATGTACAAGGACAACTGAACTGCAGTGTAGTGATGATGAAGCTCTTACCAACCATTAGCATAGCAATAAACTAGAAGGAATGAA

Function

symbol description
slc35d2 Predicted to enable antiporter activity and pyrimidine nucleotide-sugar transmembrane transporter activity. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be active in Golgi apparatus. Orthologous to human SLC35D2 (solute carrier family 35 member D2).

NR:

description
UDP-N-acetylglucosamine/UDP-glucose/GDP-mannose transporter-like

GO: NA

KEGG:

id description
K15281 SLC35D; solute carrier family 35

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021622091.2 True 1635 mRNA 0.40 12 71431838 71442390

Neighbor

gene id symbol gene type direction distance location
LOC110536344 habp4 coding downstream 20060 71408354 ~ 71411778 (-)
LOC110536342 efna5 coding downstream 687703 70557009 ~ 70744135 (-)
smyd1b smyd1b coding downstream 1318796 70100122 ~ 70113042 (-)
LOC110536332 LOC106580566 coding downstream 1401418 70026208 ~ 70030420 (-)
LOC110536645 NA coding downstream 1431892 69996328 ~ 69999946 (-)
LOC110536347 NA coding upstream 3357 71445747 ~ 71452891 (-)
ubox5 LOC106580617 coding upstream 16946 71459336 ~ 71466142 (-)
LOC110536349 LOC106580618 coding upstream 30769 71473159 ~ 71488892 (-)
LOC100135988 slr coding upstream 82473 71524863 ~ 71599164 (-)
LOC110536351 NA coding upstream 178410 71620800 ~ 71627496 (-)
G1013649 NA non-coding downstream 23944 71406953 ~ 71407894 (-)
G1013653 NA non-coding downstream 24976 71405643 ~ 71406862 (-)
G1013654 cdc14b non-coding downstream 26235 71404672 ~ 71405603 (-)
G1013651 NA non-coding downstream 34922 71396691 ~ 71396916 (-)
G1013648 NA non-coding downstream 35778 71395834 ~ 71396060 (-)
G1013668 NA non-coding upstream 64968 71507358 ~ 71509002 (-)
G1013729 NA non-coding upstream 169060 71611450 ~ 71611739 (-)
G1013740 NA non-coding upstream 174956 71617346 ~ 71617552 (-)
G1012814 NA other downstream 540847 70884476 ~ 70890991 (-)
G1011014 NA other downstream 2125410 69305336 ~ 69306428 (-)
G1010922 NA other downstream 2312352 69116507 ~ 69119486 (-)
G1010443 NA other downstream 2743876 68687257 ~ 68687962 (-)
G1009720 NA other downstream 3460510 67971071 ~ 67971328 (-)
G1013669 NA other upstream 54918 71497308 ~ 71515434 (-)
G1013960 NA other upstream 553691 71996081 ~ 71996688 (-)
G1014411 NA other upstream 916895 72359285 ~ 72359505 (-)
G1014639 NA other upstream 1004264 72446654 ~ 72449340 (-)
rnft2 rnft2 other upstream 2861260 74303648 ~ 74312488 (-)

Expression


Co-expression Network