LOC110536354 (LOC106585207)


Basic Information

Item Value
gene id LOC110536354
gene name LOC106585207
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 71838302 ~ 71846693 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021622102.2
GACTAATTATCCTACGAAAAACTGCGCGTGGGATTTCAGAAACTGGACAACTCCACGTCCAAGCGGTATTGTAGCACTGTGGACACTGCAATTTTATCTAATACCTTTGACGAATTTTTGCAAATATAATGAATTGTTTCATAGTGTAACCATTTCCTATGGTAGTGCTAGACTAGGCAATGCCTAGGCTATTTAATGAGAATACATTTAATGAGAATTTTACCCGAGTCTAGGCTCTGGTTTGCTGGGTCCTATTAGTATTCCTGTCCTATGGGTGTGCAGTGTTGCCAGCCACGTCAGGCCTGTAGCAACTGCTTGTCTCCTGCCTCACCAAGGCAAGGTTAGATACATTCGGCTGAAGACACTCGAAGAAAAAGACCTTGGGAACAAATTCAGCATCTTGGCAACCAGGAATTGCTTTCCTCTCTGTTTCTAGTAGGCCTAGTGATGAAGCAAGTGTTATTATTGCCTGAAGTTACATAGCTTTCTTTATTTGGACGTTTCGCAACATTTTTGCTTTTCCAAAAGGGAATGTTTGCATAGCTACATTGCCGAAGACCCTCCTCAAGCCGTATTCTCCGTGTTTAATGGAAACGCAAAATTATAAGAAATGGTTGCATTTTGCGAATACCAGTGATTGCTTTCTACGGACCATCACAACTGCGGTGCGCGAGGAAGGACGCCTCAGCTTGTTGGACCCCGGGTCGAGTGTGTGTATAGGCTACGGTTACCGTATACCATCAGTTGGACTGCTGGAGTGAAGGTGACTCGCGCCCCCTTTACAGTCGAGGCAATGCGGAGAGGAGTCGCAGGCGCTCATCCGGTACTTCTGCGCTCTGACGGCAGCCTGCAAAAATATATTCTTCTTCTTagacggtagagagagagagagagagagagagagagagagagagagagagagagagcagtaacaCACCACAGATAAACTATATATCCTATCCGTTTTAGGATATATCCTACTGGAGAGGTTTCGACACCACAAACGATAGAAAGAACTGGATATCGGCCAATAGGTGGTGGTGGAGTTTAGGGGGACGTAGATTAACAACGTTCTGTATTAGAGCTGTTTTATTAGTGGATGTGTATGCATGAGTTCTGCACCGAATGGGCGCAAGAACCGCCCCAGATCCGCCGGGAACATCTTCCAGATCGGCAAGGCTCCCTACCGAGACccggagaggagggagagcacGGAGAGCACCCGCAAAGCCCAGCGCGCCGTGGCGGACTGCAGAATGATTGTGCAGGAGTTTAACACGCTTGTGGCGCTGTATCGTGAGCTGGTCATCTCCATTGGCGAGATCTCTGTCGACTGCCCGTCGTTACGGGCCGAGATGCACAAGACCCGAACTAAAGGCTGTGAGATGGCGAGAGCCGCAAACCAGAGCCTGTCAGTCATTTCAGGGCCTGAGGACGGAGAGATTCACCCAGAGATCTGCAGGCTCTTCATCCAGCTGCAGTGCTTTCTGGAGATGTACATCACAGAGATGctcaagtctgtctgtctgctgggatCCCTGCAGCTCCACAGGAAAGGGAAGGATTGCTGTGGGCCTCCCAGGATTGACGGTAAGGTGGATGAGAGCTCAGACATCCCCATTCTAGAAGACACCTCCTCCCCCATGGACTGTCATCAGCTCTGCTGTCTGGTCACCACAGACATAGACAATACTGAGAGGGACATGAGAGAGATGAAGAACCTTCTCAGTAAACTCAGGGAGGCGATGCCTTTACCACTGAAGAACCAAGATGACAGCAGCTTGCTGAACCTAACTCCCTACCCACTGGTCCGACAGAGGAAGAGACGGTTCTTTGGGCTCTGTTGCCTGGTAACCAGCTAAGGGGCCTGCCCTCCTGGGTTGAAGGCAGGAACGGTAATGCTTAAGTTGAAGTGTTGTTCATGGCACATCCATAAAAGTGTCCTATGCACATCATAATTCAAGTGTCAAAAGACAAGTTATAAAAGCTTTGTCAACTGGAATGACATACAGTATTTGCATGTCACAACCAATATATTTATTTGCATTATGACATGGTGTCATAAGATATTGACAGTTATCATAACAGTGCCCCATAAAGGAAAGAGCATAGAATTAAATATTTTGTCATGTGTCATGGGCAACACTGCACGTAAAGTGCTACTGCTGCAACAAAGACACCATTACCCACAATCCTTCACCACTTGTGTCTCCCACCACTATATTACTGCCATTTCCAATATCCAATACAGTTCTCTCTTTGTTGAAAAGGCTACCCCATTTTATAATTTTATTTTGTAATACAAAGATAAATTGTAATTGCAATGTAATGAAACCAATAgtcaaaacatatattttaaatgttttgcaACTGCTTTTCTTTTCGTTTGGTACAGAAGTCCAACCTTTTTGTTTGGTACAGAAGTCCAACCTTTCGTTTGGTACAGAAGTCCAACCTTTTTGTTTGGTACAGAAGTCCAACCTTTTCGTTTGGTACAGAAGTCCAACCTTTTCGTTTGGTACAGAAGTCCAACCTTTTCGTTTGGTACAGAAGTCCAACCTTTTCGTTTGGTACAGAAGTCCAACCTTTTTGTTTGGTACAGAAGTCCAACCTTTTTGTTTGGTACAGAAGTCCAACCTTTTCGTTTGGTACAGAAGTCCAACCTTTTCGTTTGGTACAAAAGTCCAACCTTTCTGTTTGTCAAAGGTTTtcgggagagagagaccatttgAAACAATGTCAACATTTAGTTTCTTCCATAAAGCTGAATTGATGAATTAATGAATTGTGTGTAGGACACAATTTGATCCTTAAGTTTGTTTCAAAAACAATGTTAGCAAGTACGACACTTGCCATGTGTTGCAATACTTTCCCAATATGACCGGTTGAAGTTAGACACTTGCAGTAAACAGATATGCTATTTTAGGGCTCCATTCAATCTGTATCCCTGAAGCGTTAAAGATTGCACAAtttaaatgtaaaggtaatttctgattgagTTGACATACGcagcgtttactgtgaatgcagtcttcGCTAACATTGCCTTTGATTTTTCAATCACGCTTTAAAGCTGAACTTCCGCGATACGCATTGAATAAAGcccttaatttgatcactctgttgtcaCAGATAATTTTCCTGCTCCGCAGGAAAtgaaaacttgtagtgtatttaaaTTTTTAAAAgtattctaaagtttgtaatttccagtttaaaatgtcagacttgacttACCCTAATGTAAAATGTATCTACCCCTacaaaaaaatgtccattcattataatccacataataattcacatgacctgttgctgcaggattattttcccgcTGTGAAAAACTAGTCAAATTAAGATAGCAGATCTGTATATGTACACTACTAGATAAAAGGCATAGAGCTGTTTTTCCAGAGCAGAGAAAGTCTGTGCACTACGTCTGTTGTCTGTTTCGTTCTCTGTTTTCCATTTCTAGCTGACCCTGTACTTCCTGTACTGACCTTGATTTAGTCTTCCATGAACCAAACACCTGTACCTGACTTTTACTTTCCATCTTCAAGGAGGaatatactatacaatactaacaaaaatataaacttctTTGCACATACAATATCTATCTATAAATGAAGACATTAGACATACtctatgtatgtatatacacatacTCTCCAATCGATGAGCTCTGGAAAATCTTCGAAGTTGAGATAGATTGGTGAAGTCTTGGTTGGCATAAGCAGGTGACGTCTCCCTTTGTAAGGCACAGTCTGTGCGGGTAGTGGGGACTCAGCATGGGTTTTGCTTATTAGTAATAGTGATATATGTGTAGGGCATGGAGaaggtacagtactgtagtcaagCTGAAATAAAAAGCTGTATGTCATTTTACATTGTTAATAAACTTTTTTATTTAAACTGa

Function

NR:

description
regulator of G-protein signaling 7-binding protein A-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021622102.2 True 3919 mRNA 0.43 6 71838302 71846693

Neighbor

gene id symbol gene type direction distance location
LOC110536352 LOC106580621 coding downstream 205239 71628579 ~ 71633063 (-)
LOC110536351 NA coding downstream 210806 71620800 ~ 71627496 (-)
LOC100135988 slr coding downstream 239138 71524863 ~ 71599164 (-)
LOC110536349 LOC106580618 coding downstream 349410 71473159 ~ 71488892 (-)
ubox5 LOC106580617 coding downstream 372160 71459336 ~ 71466142 (-)
LOC118937382 NA coding upstream 595276 72441969 ~ 72442889 (-)
LOC110536359 LOC106580625 coding upstream 606227 72452920 ~ 72584061 (-)
LOC110536361 LOC106585212 coding upstream 751094 72597787 ~ 72647320 (-)
LOC110536362 LOC106580628 coding upstream 803966 72650659 ~ 72704404 (-)
LOC110535109 LOC106580631 coding upstream 916307 72763000 ~ 72842417 (-)
G1013751 LOC106580620 non-coding downstream 153707 71648700 ~ 71684595 (-)
G1013745 NA non-coding downstream 201546 71636484 ~ 71636756 (-)
G1013741 NA non-coding downstream 219784 71618311 ~ 71618518 (-)
G1013740 NA non-coding downstream 220750 71617346 ~ 71617552 (-)
G1013729 NA non-coding downstream 226563 71611450 ~ 71611739 (-)
G1013892 NA non-coding upstream 760 71847453 ~ 71847833 (-)
G1013893 LOC106580708 non-coding upstream 1725 71848418 ~ 71849016 (-)
G1013894 NA non-coding upstream 2508 71849201 ~ 71849463 (-)
G1013895 NA non-coding upstream 3673 71850366 ~ 71850673 (-)
G1013901 NA non-coding upstream 12867 71859560 ~ 71859794 (-)
G1013669 NA other downstream 322868 71497308 ~ 71515434 (-)
G1012814 NA other downstream 947311 70884476 ~ 70890991 (-)
G1011014 NA other downstream 2531874 69305336 ~ 69306428 (-)
G1010922 NA other downstream 2718816 69116507 ~ 69119486 (-)
G1010443 NA other downstream 3150340 68687257 ~ 68687962 (-)
G1013960 NA other upstream 149388 71996081 ~ 71996688 (-)
G1014411 NA other upstream 512592 72359285 ~ 72359505 (-)
G1014639 NA other upstream 599961 72446654 ~ 72449340 (-)
rnft2 rnft2 other upstream 2456957 74303648 ~ 74312488 (-)
G1017417 NA other upstream 3043706 74890399 ~ 74891140 (-)

Expression


Co-expression Network