LOC110536449 (LOC106570861)


Basic Information

Item Value
gene id LOC110536449
gene name LOC106570861
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 78468533 ~ 78476320 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036936451.1
ACACAGATTAACAGAGAGGTTCTCATCGCAGAGCAGAGATAATCTCATCACAGAGCAGAGATAGTCTTATCACACagcagagaagagaagacagacagacagaggaaaccTTTACAGAGAATCACAAACAGACATAATCTACATTTCACACATCTCTCCTCCGTTCTCTGGAAGACATCTTCACTCAGTGTTAGTCCAGACACCTCCGTACGGCTCAGTTTATCAGTGACCTATCATGGCGTCTACCATGGACAGTGCCAAGatcctcttctctgttctgtttctctaCGTCTGCTACCAGGtGACTCATGGCCAGATGGTGATGGACTGCTGTCTGGAGGTCAACAAAAAAGAGATCCCACAACGCATTGTCACTGGTTACCAGCCTCAGGTTAGGGGTCAAGGCTGCTCCATTGACGCCATGGTCTTCAACACCAGAAAGGGACGTAGGCTGTGTGCCCCCACCGGCCCTGCCTGGGTTACTAACCTGATGAAACACATGGACAAGCTGATCAAGATGTGCGATGACACCAACTTCAAGGGTAAACACTGTAAGAAGTTGATGTCCAAGCAGTCCTAAAGTCCCAATTGGAcgccctccctccaccctcactGCCACCTCACTGCCACCTCCACCCCCCTTCTCCTGGTCCatgggagttttttttttttaaatgaatggaAAAATGTGATTCCTCCTACCACTAGTGCACTTTTTCAGTTTCCTTCCATCTTCAGTCTTTATCCAGCAGACCATGTTGTTTCTTCTGTCAGTTTTTACCCAGCATGCCATGTTGTTTCCTTCTGTCTTCAGTTTTTACCCAGCATGCCATGTTGTTTCCTTCTGTCTTCAGTTTTTACCCAGCAGACCATGTTGTTTCCTTCTGTCTTCAGTTTTTACCCAGCAGACCATGTTGTTTCCTTCTGTCTTCAGTTTTTACCCAGCATGCCATGTTGTTTCCTTCTGTCTTCAGTTTTTACCCAGCAGACCATGTTGTTTCCTTCTGTCTTCAGTTTTTACCCAGCAGACCATGTTGTTTCCTTCTGTCTTCAGTTTTTACCCAGCATGCCATGTTGTTTCCTTCTGTCTTCAGTTTTTACCCAGCAGACCATGTTGTTTCCTTCTGTCTTCAGTTTTTAACCAGCAGACCATGTTGTTTCCTTCTGTCTTCAGTTTTTACCCAGCATGCCATGTTGTTTCCTTCTGTCTTCAGTTTTTACCCAGCAGACCATGTTGTTTCCTTCTGTCTTCAGTTTTTACCCAGCAGACCATGTTTTTTTCTTCTGTCTTCAGTTTTTACCCAGCATGCCATGTTGTTTCCTTCTGTCTTCAGTTTTTACCCAGCAGACCATGTTGTTTCCTTCTGTCTTCAGTTTTTACCCAGCAGACCATGTTGTTTCTCAGTGGCACATTCATGTACTatatcttttatatattttatgtGACAAAATGATAAATAACATTCCAGAAAGAGTAAATTAGCTTTGATTCCACCTGGGAaccttaaagctacagtctgggattGGAAAAGTAATAAAACAACTATTTTATTAACATGTATTTAATCAGGGGAGCCACATTGAGACCAGGGACTCATTTTCAATGGCGCCTTTAGATCACAAAGCTATAACGTGTTTAGCTAGCTGATATGtgaaatacctatccaggcaagTTAAGGTTTCAGCAACGCCTGGGCTGAGGAGAGTGCCCTATAGCTTTAAGGTCATAAgtcaggggttaaaggtcaggggtcaAAATGTACTGGCAGCTGGTTCAAACACCCATCTTTAAATTAAACTCAGAGACAATCAAACATTTGCTAACTTTTTGTGAACTTTGCATttaattaatatatatttttcattgaTCTTTTTAACAATGACTGTCAAATCAAGATTTTCAGTGAACTTGAATTCATTTTTTAATTAAATGAGACCTTTAATGACTAACCTCAAAAGGTAAAATATTGTAGTTCATTGATACCTTGCTCTTGTCTATTTTGATGGATTAAACTGTGAGTAGATTAAATTA

Function

NR:

description
C-C motif chemokine 19-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036936451.1 True 2032 mRNA 0.42 4 78468533 78476320

Neighbor

gene id symbol gene type direction distance location
LOC110536447 LOC106570860 coding downstream 35047 78414793 ~ 78433486 (-)
LOC118936501 LOC106570849 coding downstream 646979 77778061 ~ 77821554 (-)
LOC110535124 LOC106570849 coding downstream 690511 77759929 ~ 77778022 (-)
erap1b LOC106570844 coding downstream 742612 77700933 ~ 77725921 (-)
rad17 rad17 coding downstream 808670 77645962 ~ 77659863 (-)
LOC110536450 LOC106570886 coding upstream 8796 78485116 ~ 78487202 (-)
cnot6l cnot6l coding upstream 298245 78774565 ~ 78797212 (-)
LOC110536655 LOC106570895 coding upstream 718553 79194873 ~ 79224499 (-)
LOC110535130 LOC106570891 coding upstream 782991 79259311 ~ 79265496 (-)
LOC110535133 LOC106570898 coding upstream 1404698 79881016 ~ 79984913 (-)
G1020790 NA non-coding downstream 10049 78457143 ~ 78458484 (-)
G1020789 NA non-coding downstream 12665 78453588 ~ 78455868 (-)
G1020767 NA non-coding downstream 64480 78403285 ~ 78404053 (-)
G1020763 NA non-coding downstream 77184 78389240 ~ 78391349 (-)
G1020719 NA non-coding downstream 129523 78322958 ~ 78339010 (-)
G1020796 NA non-coding upstream 3785 78480105 ~ 78480631 (-)
G1020813 NA non-coding upstream 33830 78510150 ~ 78510530 (-)
G1021075 NA non-coding upstream 41720 78518040 ~ 78518259 (-)
G1021095 NA non-coding upstream 71279 78547599 ~ 78552566 (-)
G1021104 NA non-coding upstream 95878 78572198 ~ 78572586 (-)
ccdc125 ccdc125 other downstream 840967 77619098 ~ 77644804 (-)
G1019926 NA other downstream 891869 77575871 ~ 77576664 (-)
G1019413 NA other downstream 1511716 76955366 ~ 76956817 (-)
G1019056 NA other downstream 1922792 76545108 ~ 76545741 (-)
ckap2l LOC106570813 other downstream 2221646 76202025 ~ 76246958 (-)
G1021084 NA other upstream 77308 78553628 ~ 78566847 (-)
G1021129 NA other upstream 157301 78633621 ~ 78634401 (-)
G1021664 NA other upstream 946190 79422510 ~ 79423479 (-)
G1021853 NA other upstream 1228899 79705219 ~ 79705722 (-)

Expression


Co-expression Network