Item | Value |
---|---|
gene id | XLOC_028484 |
gene name | foxm1 |
gene type | coding |
species | zebrafish (Danio rerio) |
category of species | model fish |
Item | Value |
---|---|
chromosome id | NC_007115.7 |
NCBI id | CM002888.2 |
chromosome length | 78093715 |
location | 5807964 ~ 5831522 (-) |
genome version | GRCz11_2017_zebrafish_Genome |
symbol | description |
---|---|
foxm1 | Predicted to enable DNA-binding transcription factor activity and RNA polymerase II transcription regulatory region sequence-specific DNA binding activity. Predicted to be involved in regulation of cell population proliferation and regulation of transcription by RNA polymerase II. Predicted to act upstream of or within G2/M transition of mitotic cell cycle and regulation of transcription, DNA-templated. Predicted to be active in nucleus. Orthologous to human FOXM1 (forkhead box M1). |
id | name | namespace |
---|---|---|
GO:0006355 | regulation of transcription, DNA-templated | biological_process |
GO:0042127 | regulation of cell population proliferation | biological_process |
GO:0000086 | G2/M transition of mitotic cell cycle | biological_process |
GO:0006978 | DNA damage response, signal transduction by p53 class mediator resulting in transcription of p21 class mediator | biological_process |
GO:0000122 | negative regulation of transcription by RNA polymerase II | biological_process |
GO:2000781 | positive regulation of double-strand break repair | biological_process |
GO:0071156 | regulation of cell cycle arrest | biological_process |
GO:0001570 | vasculogenesis | biological_process |
GO:0045944 | positive regulation of transcription by RNA polymerase II | biological_process |
GO:2000377 | regulation of reactive oxygen species metabolic process | biological_process |
GO:0005634 | nucleus | cellular_component |
GO:0043565 | sequence-specific DNA binding | molecular_function |
GO:0003677 | DNA binding | molecular_function |
GO:0003700 | DNA-binding transcription factor activity | molecular_function |
GO:0000977 | RNA polymerase II transcription regulatory region sequence-specific DNA binding | molecular_function |
GO:0019901 | protein kinase binding | molecular_function |
id | description |
---|---|
ZDB-GENE-040426-1275 | Predicted to enable DNA-binding transcription factor activity and RNA polymerase II transcription regulatory region sequence-specific DNA binding activity. Predicted to be involved in regulation of cell population proliferation and regulation of transcription by RNA polymerase II. Predicted to act upstream of or within G2/M transition of mitotic cell cycle and regulation of transcription, DNA-templated. Predicted to be active in nucleus. Orthologous to human FOXM1 (forkhead box M1). |
ensembl_id | ENSDARG00000003200 |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
TCONS_00055278 | False | 3385 | mRNA | 0.45 | 9 | 5807964 | 5831522 |
TCONS_00055279 | False | 695 | mRNA | 0.54 | 5 | 5809831 | 5826320 |
TCONS_00055280 | False | 742 | lncRNA | 0.52 | 3 | 5809866 | 5825924 |
TCONS_00055281 | True | 745 | mRNA | 0.46 | 3 | 5827140 | 5831036 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
XLOC_028483 | pgm3 | coding | downstream | 12655 | 5784970 ~ 5795309 (-) |
XLOC_028482 | ccnc | coding | downstream | 32457 | 5764486 ~ 5775507 (-) |
XLOC_028481 | faxca | coding | downstream | 43709 | 5750854 ~ 5764255 (-) |
XLOC_028478 | NA | coding | downstream | 62079 | 5693170 ~ 5745885 (-) |
XLOC_028485 | slc5a8 | coding | upstream | 18703 | 5850225 ~ 5863906 (-) |
XLOC_028486 | arl1 | coding | upstream | 75436 | 5906958 ~ 5913338 (-) |
XLOC_028487 | NA | coding | upstream | 281919 | 6113441 ~ 6116670 (-) |
XLOC_028488 | NA | coding | upstream | 346064 | 6177586 ~ 6252483 (-) |
XLOC_028489 | MDFIC | coding | upstream | 508050 | 6339572 ~ 6416414 (-) |
XLOC_028480 | NA | non-coding | downstream | 68026 | 5739010 ~ 5739938 (-) |
XLOC_028479 | NA | non-coding | downstream | 70619 | 5735370 ~ 5737345 (-) |
XLOC_028474 | NA | non-coding | downstream | 254782 | 5545002 ~ 5553182 (-) |
XLOC_028471 | NA | non-coding | downstream | 348495 | 5421746 ~ 5459469 (-) |
XLOC_028491 | NA | non-coding | upstream | 745255 | 6576777 ~ 6580547 (-) |
XLOC_028493 | NA | non-coding | upstream | 1188928 | 7020450 ~ 7024297 (-) |
XLOC_028494 | FO681358.2 | non-coding | upstream | 1353673 | 7185195 ~ 7185311 (-) |