LOC110535140 (parp8)


Basic Information

Item Value
gene id LOC110535140
gene name parp8
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 82160968 ~ 82245174 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036936522.1
tcactgaaacatttgatctcttACCGGTTATCGATTTACAAAATTTGAATCTGTAACAAACCGAGTGGAATGCTTTTTgcagactttaccctttgccagaagtgtttttctttctctccatttTAATTGAATGCACACGCCAAcatcacagagtaggcgttccccaTCGGAAAAATCCAAATAAATGCCAGAGGATCTCACTAACTGGCGCTTGTTCGGCCCGTTATGATTCATTTGCCttcattggaaacgacaggctcaGGTCTATCTTGGTTAATAACAATCTTTGATCTAAGCTTTACAGATCGCCATTATTGGGTTTAGCAGTGGAATAGCGATTAAGAGTGCAGACTGGGGCTTTAGGAGTAAAAGTGGAACAGGCTATTTTAATGAAATCCATCGAAGTGCGGAACTACTACTACTGCCGACTCCTGCTGTATAATAGTATCATCATCGGTTGTTATTCGAGATGATATCCGCTACGAGCTGAAACGAAACGGTACGAAGATCGGACACCTGGAATACAACCAAAGCAGAATCAACCAGCCAGCCCAGCTCCATCGAACATTCAGTTTACTGGAAATACATCAGTCCTTTGATGGGATCTTATTTTGCCTTTATTAGAGAAGAGAAGCCATTCCCGTGGGGTTTATTTCATGGGGATGTGTTCAAGACAAGAGAGAATACAAAAAGACGTCAACATCGTAATTCAAAGGTGCAAGGCAGAGAAAGACTGCCTTTTCTctgatttcagATACTCTGACGCCACCTTCACCTTCACCTATTCCAAAGGCTCCAGAAGggTGTCGTACTCTGTGCACGTCTCTGATGACTACCCAGACAATACATACGTGTCAAACTCTGAGAACGAGGATGAAGTTCTAGTCACCAGAGACCAGATCCCCGTCATCTTCCACAGGATAGCAACAGAGATTAGGGTCAATAATGACGCCAACTGCTGCCTGTCCATCAAGTCCAAACATCAGATAGACAAGAATCAGTGCCACTATGCCATAGAGGAGGACTCTGAGGGGGATGCTGACTCTGAGGAGTTTTACTATGGAGGTCAGGTGAACTCTGATGGCGAGCTCCACAAGCACCCCCAGTTGGAGGTGGACCTGGCTGCGGTCCGGGAGATGTACGGACACCACGCAGTATCTCTcagggaatacggtgccatcgACGATGTGGACATTGATCTCCACATCGACGTCAGTTTCCTAGATGAGGAAATAGCCCTGGCGTGGGACGTGATCCGCAGGGAGCCAGTGATCGTGCGTCTCCACTGCTCTCTGACACAGTACCTGAATGGACCGGTCCCCACGGTGGACGTATTCCAGGTGTCGACTAAAGACCGGTTTGGACTGGGACATCAGATGAAGAAgATAATGCAGACGTTTGTCACCCTGCAGTGGAAACTCCAAAGTGAAGAGAAACTCAACTGCTCTCGCAACAAAAACAAGGGCGACAAGAAGGGCAAATCTCCCCTCCACATCTTCTCGACCCTCCGCAGATCTCCCAGCTACCCGCCTCCCGGCTGTGTCAAGAGCAAAAAGAAGCTGAAGCCAGAACAAGATGGCGTCTCTAAATCCCACCGCCTTCTCCGACGGACTTACACCAGCACCGCCAAACAGCAGGTGGAGGTGGACGGCTGCGGCCCCGGGACCAAGACTACCCACCGTCTCCTGGGCCTTTCCCTGTCCAGCGGAGACCCCCGTATGGACCACGGAGGAGGGCCCGGACCACTGCCCTTCAAACCCCACCGCCTGGGCAGGCCCTGCATGGCTGTGGTCAAACCAGAGGACCTCCGACCCGCTCCCCATAAGCTCCTGCCTCGCTCGTGCTCTGGCGACCCCCGCTGTGAGCATGCGGGAgtgggaggagGTAGTCTTGGGGGAGGTTTAAAGCACCACAGGCTGCTCAGTAGGTCGTGCTCTGGTTCTATCAGGACGGAGGAGCTGGATGGACTgaaacaccaccacctcctcagcAGgtcctactcCAGCAGTACCAAGATGGGCAAAGCAGCGGACATCTTCAAggactctgtgtctctgtctgaggGGAGGCGGCTCTCTCTTACCTCAGGGCTCATCGGGATCCTCGCCCCCTCGCTCGCCACGCCAACGCCGCCAAACAATGGAGCCAAGTCCATACCAATAAAAGACAGAGGTTTCCTCGTCCAGACCATGGAATATGCTGAGCAGAGGATTCCGGTCCTGAACGAgttctgtgtggtgtgtgacGAACCACATGTGTTCAGGAACGGACCCATGCTCCGACCCACCGTGTGTGAGCGGgaactgtgtgtgtttgccttTCAAACACTGGGGGTGATGAACGAGGCAGCCGACGAGATCGCCACAGGGGCTCAGGTGGTGGACCTGTTGGTGTCCATGTGTAGGTCTGCTCTAGAGTCTCCCAGGAAAGTGGTCATCTTTGAGCCATATCCCTCTGTGGTGGATCCGTGTGACTCCCAGGCACTGGCCTTCAACCCCCGGAAAAAGGACTATGACCGAGTGATGAGAGCCCTTGACAGTCTCACCTCTATCAGAGAAATGTCCcagGCACCTTACCTGGAGATTAAGAGGCAGATGGACAAGCATGATCCTTTAGCTCACCCCTTACTGACATGGGTAATATGCAGTAACAGGTCACACATCGTCAAGCTACCAGTAACCAGACAGTTGAAGTTCATGCACACCCCGCACCAGTTCCTTCTACTCAGCAGTCCTCCTGCCAAAGAGTCCAACTTCAGAGCTGCCAAAAACCTCTTTGGGAGTACCTTCGCTTTCCATGGTTCTCACATAGAGAATTGGCACTCCATTTTGAGAAACGGTTTGGTGGTTGCATCCAACACAAGACttcagCTCCATGGCGCCATCTACGGGAGTGGGATCTATATCAGCCCAATGTCAAGCATATCATTTGGTTACTCAGGGATGAACAAAAAACAGCTGAAAGTTACTTCGAAGGACGAAACTGCTACAAACAAGACCAACTTACAGTCAACAAAGAAAGGACAGCAGCCCCAGTTTTTGCAAAGTCGGAACCTAAAGTGCATAGCCTTATGTGAAGTAATCACATCCCCTGACCTGCACAAACATGGAGACATCTGGGTCGTTCCCAACACTGATCATGTCTGTACACGCTTCTTCTTCGTTTATGAAGATGGTCAGGTGGGGGATACGAGCATCAACACACAAGACGCTGGCATCCATCGAGAGATCCTACGAGTCATCGGCAACCAGACTGCCACGGGATGAACAACACAGCAATActgctgcctctcctcctccacctctcagcTCAAAGCTGGATTTTTTTTGAGCTGCGGAGGCCCGTCGTACCAAGTGTTTCCTTCCGATCAACGCAGAGAACACACAAACAACTTCAAAGTTTGAAACCTCAGCACACACATGTACAACTGAAACGCAACAGAACTCGAGGGAAGAACACATTTTTGCTAAGTTTCTAAATACTATGAAGAATCCTGCTTTTCCTGAAGACACAGTACGTCTTTGTTTGACTGATTGGGACGATTTCATTTTTTTGTAGAGAACGTTTAAAACGGTAACTCTTTGGTGAATATTTTGAGACTTTTTGCTAGTGGGCCTTTTCGGGGAAAAATAACTAGGAAAAAGTTCCTTCCTGTCTAGGAAAAAGTTCCTTCCTGTCTAGGAAAAAGGTCCTTCCTGTCTAGGAAAAAGGTCCTTCCTGTCTAGGAAAAAGGTCCTTCCTGTCTAGGAAAA

Function

symbol description
parp8 Predicted to enable NAD+ ADP-ribosyltransferase activity. Predicted to be involved in protein ADP-ribosylation. Orthologous to human PARP8 (poly(ADP-ribose) polymerase family member 8).

NR:

description
LOW QUALITY PROTEIN: poly [ADP-ribose] polymerase 8-like

GO:

id name namespace
GO:0003950 NAD+ ADP-ribosyltransferase activity molecular_function

KEGG:

id description
K15258 PARP6_8; poly [ADP-ribose] polymerase 6/8

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036936522.1 True 3752 mRNA 0.50 27 82160968 82245174

Neighbor

gene id symbol gene type direction distance location
LOC118937423 NA coding downstream 1725 82157654 ~ 82159243 (-)
LOC110536483 isl1 coding downstream 232754 81920366 ~ 81928214 (-)
LOC118937459 NA coding downstream 349855 81810059 ~ 81811117 (-)
LOC118937401 NA coding downstream 373428 81764643 ~ 81787540 (-)
fsta LOC100301657 coding downstream 589369 81558951 ~ 81571599 (-)
LOC110536485 NA coding upstream 7354 82252528 ~ 82257457 (-)
LOC110536484 LOC106570928 coding upstream 12656 82257489 ~ 82522382 (-)
LOC110536491 LOC106570936 coding upstream 285062 82530236 ~ 82563337 (-)
LOC110536490 zfr coding upstream 336542 82581716 ~ 82619626 (-)
LOC118937424 NA coding upstream 622927 82868101 ~ 82871020 (-)
G1024244 NA non-coding downstream 88887 82069350 ~ 82072081 (-)
G1023939 NA non-coding downstream 99858 82060869 ~ 82061110 (-)
G1023933 NA non-coding downstream 101711 82059055 ~ 82059257 (-)
G1023918 NA non-coding downstream 156020 82001608 ~ 82004948 (-)
G1023903 NA non-coding downstream 192502 81957057 ~ 81968466 (-)
G1024359 NA non-coding upstream 81512 82326686 ~ 82328866 (-)
G1024368 NA non-coding upstream 109040 82354214 ~ 82359457 (-)
G1024391 NA non-coding upstream 170687 82415861 ~ 82416430 (-)
G1024393 NA non-coding upstream 180925 82426099 ~ 82426671 (-)
G1023858 NA other downstream 246601 81912957 ~ 81914367 (-)
G1023618 NA other downstream 543739 81615253 ~ 81617939 (-)
G1023156 NA other downstream 1020389 81139984 ~ 81140579 (-)
G1023036 NA other downstream 1262965 80893902 ~ 80898003 (-)
G1022604 NA other downstream 1619989 80540452 ~ 80540979 (-)
G1025481 NA other upstream 1317128 83562302 ~ 83565574 (-)
G1025467 NA other upstream 1376549 83544297 ~ 83626790 (-)
G1025498 NA other upstream 1470509 83683265 ~ 83718776 (-)
ypel1 ypel1 other upstream 1628726 83873900 ~ 83903039 (-)

Expression


Co-expression Network