Item | Value |
---|---|
gene id | mccc2 |
gene name | mccc2 |
gene type | coding |
species | rainbow trout (Oncorhynchus mykiss) |
category of species | economic fish |
Item | Value |
---|---|
chromosome id | NC_048575.1 |
NCBI id | CM023229.2 |
chromosome length | 86280908 |
location | 84084529 ~ 84111823 (+) |
genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
symbol | description |
---|---|
mccc2 | Predicted to enable ligase activity. Predicted to contribute to methylcrotonoyl-CoA carboxylase activity. Predicted to be involved in leucine catabolic process. Predicted to be part of methylcrotonoyl-CoA carboxylase complex. Predicted to be active in mitochondrion. Human ortholog(s) of this gene implicated in 3-Methylcrotonyl-CoA carboxylase 2 deficiency and mitochondrial metabolism disease. Orthologous to human MCCC2 (methylcrotonyl-CoA carboxylase subunit 2). |
description |
---|
methylcrotonoyl-CoA carboxylase beta chain, mitochondrial |
id | name | namespace |
---|---|---|
GO:0008152 | metabolic process | biological_process |
GO:0016874 | ligase activity | molecular_function |
id | description |
---|---|
K01969 | E6.4.1.4B; 3-methylcrotonyl-CoA carboxylase beta subunit |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
XM_036936568.1 | False | 3970 | mRNA | 0.51 | 17 | 84084529 | 84111823 |
XM_036936569.1 | False | 3882 | mRNA | 0.51 | 18 | 84084529 | 84111823 |
XM_036936570.1 | False | 3913 | mRNA | 0.51 | 18 | 84084529 | 84111823 |
XM_036936571.1 | False | 3851 | mRNA | 0.51 | 18 | 84084529 | 84111823 |
XM_036936572.1 | False | 3820 | mRNA | 0.51 | 18 | 84084529 | 84111823 |
XM_036936573.1 | False | 3789 | mRNA | 0.51 | 18 | 84084529 | 84111823 |
XM_036936574.1 | False | 3229 | mRNA | 0.51 | 18 | 84084529 | 84111823 |
XM_036936575.1 | True | 2484 | mRNA | 0.51 | 19 | 84084529 | 84111823 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
LOC110535141 | rufy3 | coding | upstream | 40100 | 83990594 ~ 84047260 (+) |
LOC118937428 | NA | coding | upstream | 43229 | 84039941 ~ 84042556 (+) |
ppil2 | ppil2 | coding | upstream | 271062 | 83778696 ~ 83813467 (+) |
psat1 | psat1 | coding | upstream | 311662 | 83745190 ~ 83772867 (+) |
LOC110536506 | LOC106570961 | coding | upstream | 355665 | 83719199 ~ 83729585 (+) |
fbxl8 | fbxl8 | coding | downstream | 2926 | 84114749 ~ 84137392 (+) |
LOC118937432 | NA | coding | downstream | 1179823 | 85291108 ~ 85295957 (+) |
fbp1a | LOC106593443 | coding | downstream | 1297996 | 85409819 ~ 85429509 (+) |
LOC118937431 | NA | coding | downstream | 1408763 | 85520586 ~ 85522159 (+) |
gas1a | LOC106570975 | coding | downstream | 1728046 | 85839869 ~ 85841283 (+) |
G1025242 | NA | non-coding | upstream | 3806 | 84078721 ~ 84080723 (+) |
G1025120 | NA | non-coding | upstream | 35445 | 84045060 ~ 84049084 (+) |
G1025235 | NA | non-coding | upstream | 54085 | 84029656 ~ 84030444 (+) |
G1025116 | NA | non-coding | downstream | 373 | 84112196 ~ 84112631 (+) |
G1025259 | NA | non-coding | downstream | 12372 | 84124195 ~ 84125793 (+) |
G1025741 | NA | non-coding | downstream | 30186 | 84142009 ~ 84143502 (+) |
G1025745 | NA | non-coding | downstream | 32509 | 84144332 ~ 84144557 (+) |
G1025108 | NA | other | upstream | 324054 | 83757462 ~ 83760475 (+) |
LOC110536489 | LOC106570933 | other | upstream | 1457189 | 82623275 ~ 82627340 (+) |
G1023978 | NA | other | upstream | 1953888 | 82127889 ~ 82130641 (+) |
G1023980 | NA | other | upstream | 1954666 | 82128825 ~ 82129863 (+) |
G1023377 | ndufs4 | other | upstream | 2540884 | 81497785 ~ 81543645 (+) |
G1026397 | NA | other | downstream | 847706 | 84959529 ~ 84960032 (+) |
G1026425 | NA | other | downstream | 872777 | 84984600 ~ 84985246 (+) |
G1026580 | NA | other | downstream | 1071977 | 85183800 ~ 85197735 (+) |
G1026612 | NA | other | downstream | 1126691 | 85238514 ~ 85239067 (+) |
G1026615 | NA | other | downstream | 1136188 | 85248011 ~ 85249118 (+) |