G933075



Basic Information


Item Value
gene id G933075
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 29993 ~ 31030 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU1063762
ggctcccgccagcttctccgggatcggtcgcgttaccgcactggacgcctcgcggcgcccatctccgccactccggattcggggatctgaacccgactccctttcgatcggccgggggcgacggaggccatcgcccctcccttccgaacggcgttcgcccatctcttaggaccgactgacccatgttcaactgctgttcacatggaacccttctccacttcggtcttcaaagttctcgtttgaatatttgctactaccaccaagatctgcacccgcggcggctccacccgggcccgcgccctaggcttccgtgctcaccgcggcggccctcctactcgtcgcggcatagccctcgaggctctcgttgccagcgacggccgggtatgggcccgacgctccagcgccatccattttcagggctagttgattcggcaggtgagttgttacacactccttagcggattccgacttccatggccaccgtcctgctgtctatatcgaccaacaccttttctggggtctgatgagcgtcggcatcgggcgccttaacccggcgttcggttcatcccgcagcgccagttctgcttaccaaaagtggtacatttaaagtttgagaataggttgagatcgtttcggccccaagacctctaatcattcgctttaccagataaaactgcgagacttcgagcgccagctatcctgagggaaacttcggagggaaccagctactagatggttcgattagtctttcgcccctatacccaggtcggatgaccgatttgcacgtcaggaccgctacggacctccaccagagtttcctctggcttcgccctgcccaggcatagttcaccatctttcgggtcctatcgcatgcgctcacgctccacctccccgacaaagcgggcgagacgggccggtggtgcgcccgaccccgtagggtcgggatcccacctcagccgacacgcgccggccctcactttcattgcgccacggggtgtgttcggagaaaaccctctgacttgcgcatgcgttagactc

Function


NR:

description
PREDICTED: uncharacterized protein LOC108892972, partial

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU1063762 True 1038 lncRNA 0.60 1 29993 31030
Loading

Neighbor


gene id symbol gene type direction distance location
gars1 gars coding downstream 32412 63442 ~ 88351 (+)
dlec1 dlec1 coding downstream 162322 193352 ~ 307840 (+)
cry-dash LOC106579757 coding downstream 309611 340641 ~ 378363 (+)
slc22a13b NA coding downstream 361082 392112 ~ 438530 (+)
LOC110535152 LOC106590691 coding downstream 454662 485692 ~ 542353 (+)
G933073 NA non-coding downstream 5155 36185 ~ 37938 (+)
G933100 NA non-coding downstream 77826 108856 ~ 110183 (+)
G933110 NA non-coding downstream 98169 129199 ~ 129802 (+)
G933117 NA non-coding downstream 110311 141341 ~ 141755 (+)
G933145 NA non-coding downstream 149097 180127 ~ 181004 (+)
G933532 LOC106594516 other downstream 530623 539980 ~ 562659 (+)
LOC110536523 LOC106563098 other downstream 565293 575640 ~ 604339 (+)
G933679 NA other downstream 694157 725187 ~ 728205 (+)
G933799 NA other downstream 918501 949531 ~ 951584 (+)

Expression


G933075 Expression in all Baseline Samples

Bar chart with 20 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 12.
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G933075 Expression in each Bioproject

Bar chart with 17 bars.
G933075 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 200.
End of interactive chart.

Co-expression Network