G933289


Basic Information

Item Value
gene id G933289
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 87780 ~ 88351 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1064019
TTCCAGTAAGAGCAGGCTCACTTTATTGAACCAGAGATGTTTTCCATTTAATCAGTCCTGAAACTGGaagtctctcttctctttccacaCAAGACTGACAACCTGAACACATTTCTCTTTTTATACCAGGCTGAGAAGATCTCTctctctccaactGAGCAGATTCCAGTACGCAGGTGAATATTTACCAGAACAGGGACAAATCATTACTCTGCCACCCTGTTTATAATTGTTCAGTACAATGATtatataacatttattttgaagTTTAATTTCAGTGGTTGCAGTTGTGTGTTAGGACATCGTGAGGACTGACTGCTTCCTGAAATACAGTTGCAGTAAAACCGTCCCTATGGATGGAGAAATGTAAAAACGTCTGTGGGCGTTTCATAGGACAGACATACTGAGTAAGATTAACTTCATTCCTCGGCAGTGTCCTTCTTGCTGGTCTCCTGTCCCTCAAAGATGGGGTACTTGCTCTCCACCTCAGCCCAAGTCATGACACCGTTTGCCAGATCACGGATGATTCCTGGCAACTCAC

Function

NR:

description
glycine--tRNA ligase

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1064019 True 541 lncRNA 0.43 2 87780 88351
Loading

Neighbor

gene id symbol gene type direction distance location
LOC110528711 NA coding downstream 52957 32994 ~ 34823 (-)
LOC118937481 NA coding downstream 55356 32271 ~ 32424 (-)
plcd1a LOC106594992 coding upstream 20467 108818 ~ 175767 (-)
acaa1 LOC106579756 coding upstream 222500 310851 ~ 341828 (-)
LOC110535149 LOC106579780 coding upstream 352988 441339 ~ 454573 (-)
bdh1 LOC106579760 coding upstream 800200 888551 ~ 899722 (-)
LOC110535157 LOC106579759 coding upstream 821372 909723 ~ 940507 (-)
G933290 gars non-coding downstream 1155 31655 ~ 86625 (-)
G933308 NA non-coding downstream 1509 85973 ~ 86271 (-)
G933291 NA non-coding downstream 56889 30648 ~ 30891 (-)
G933309 NA non-coding upstream 379 88730 ~ 89080 (-)
G933353 NA non-coding upstream 91786 180137 ~ 180856 (-)
G933389 NA non-coding upstream 159883 248234 ~ 248983 (-)
G933411 dlec1 non-coding upstream 205605 293956 ~ 294919 (-)
G933429 NA non-coding upstream 238933 327284 ~ 327636 (-)
G933466 NA other upstream 288751 377102 ~ 378317 (-)
G933971 NA other upstream 956607 1044958 ~ 1060341 (-)
G934062 NA other upstream 1068935 1157286 ~ 1159006 (-)
G934268 NA other upstream 1475243 1563594 ~ 1582122 (-)

Expression

G933289 Expression in all Baseline Samples

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The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 3.
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G933289 Expression in each Bioproject

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G933289 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 500.
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Co-expression Network