G933117


Basic Information

Item Value
gene id G933117
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 141341 ~ 141755 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1063814
ggaagataatcaaggaggtgatggagtccaggtgagtgacagatatagggaagataatcaagggggtgatggagtccaggtgagtgacagataaagagaagataatcaaggaggtgatggagtccaggtgagtgacagatatagagaagataatcaaggaggtgatggagtccaggtgagtgacagatatagagaagataatcaaggaggtgatggagtccag

Function

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU1063814 True 223 lncRNA 0.45 2 141341 141755

Neighbor

gene id symbol gene type direction distance location
gars1 gars coding upstream 52990 63442 ~ 88351 (+)
dlec1 dlec1 coding downstream 51597 193352 ~ 307840 (+)
cry-dash LOC106579757 coding downstream 198886 340641 ~ 378363 (+)
slc22a13b NA coding downstream 250357 392112 ~ 438530 (+)
LOC110535152 LOC106590691 coding downstream 343937 485692 ~ 542353 (+)
LOC118937458 LOC106594516 coding downstream 419679 561434 ~ 564576 (+)
G933110 NA non-coding upstream 11539 129199 ~ 129802 (+)
G933100 NA non-coding upstream 31158 108856 ~ 110183 (+)
G933073 NA non-coding upstream 103403 36185 ~ 37938 (+)
G933075 NA non-coding upstream 110311 29993 ~ 31030 (+)
G933145 NA non-coding downstream 38372 180127 ~ 181004 (+)
G933162 NA non-coding downstream 66365 208120 ~ 213206 (+)
G933174 NA non-coding downstream 99370 241125 ~ 241638 (+)
G933185 NA non-coding downstream 131119 272874 ~ 273180 (+)
G933202 NA non-coding downstream 169143 310898 ~ 311957 (+)
G933532 LOC106594516 other downstream 419898 539980 ~ 562659 (+)
LOC110536523 LOC106563098 other downstream 454568 575640 ~ 604339 (+)
G933679 NA other downstream 583432 725187 ~ 728205 (+)
G933799 NA other downstream 807776 949531 ~ 951584 (+)

Expression


Co-expression Network