G933162


Basic Information

Item Value
gene id G933162
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 208120 ~ 213206 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1063870
GGGTTACTCAGGTAAAGCAGGTTTAGCCTTAAAAAAACAGATTTTGTTACGGTGCGTAAATGAGGACctaaaagcgaattaacgtaaacagaacttctttaataacaaaacataggtaggctcagatagaccggcagattccgacaggacaggacaaggttgcagcaaacatgacgatagtctggttcaggcatgaaaaacacaaacaagaatccgacaaagacaggaacaaaaacagagagagatatagaggactaattagagggaaaaagggaacaggtgggaaaaggggtgacaaggtagttaggaggagacaaggaacagctgggggaaagagggggagaaaaggtaacctaataacgaccagcagagggagacagggtgaagggaaaggacagaaacaagacacaacatgacaatacatgac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1063870 True 427 lncRNA 0.44 2 208120 213206

Neighbor

gene id symbol gene type direction distance location
gars1 gars coding upstream 119769 63442 ~ 88351 (+)
cry-dash LOC106579757 coding downstream 127435 340641 ~ 378363 (+)
slc22a13b NA coding downstream 178906 392112 ~ 438530 (+)
LOC110535152 LOC106590691 coding downstream 272486 485692 ~ 542353 (+)
LOC118937458 LOC106594516 coding downstream 348228 561434 ~ 564576 (+)
LOC110536523 LOC106563098 coding downstream 362434 575640 ~ 604339 (+)
G933145 NA non-coding upstream 27116 180127 ~ 181004 (+)
G933117 NA non-coding upstream 66365 141341 ~ 141755 (+)
G933110 NA non-coding upstream 78318 129199 ~ 129802 (+)
G933100 NA non-coding upstream 97937 108856 ~ 110183 (+)
G933073 NA non-coding upstream 170182 36185 ~ 37938 (+)
G933174 NA non-coding downstream 27919 241125 ~ 241638 (+)
G933185 NA non-coding downstream 59668 272874 ~ 273180 (+)
G933202 NA non-coding downstream 97692 310898 ~ 311957 (+)
G933222 NA non-coding downstream 125092 338298 ~ 338586 (+)
G933225 NA non-coding downstream 131422 344628 ~ 344912 (+)
G933532 LOC106594516 other downstream 348447 539980 ~ 562659 (+)
G933679 NA other downstream 511981 725187 ~ 728205 (+)
G933799 NA other downstream 736325 949531 ~ 951584 (+)

Expression


Co-expression Network