G933185



Basic Information


Item Value
gene id G933185
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 272874 ~ 273180 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU1063894
gcctgaaatgtggcaaaaggtcgcaaagttcaagggggccgaatactttcgcaaggcactgtatttctacCAAAACAATTATGGGTTCAACATGATCACAACATGTACAATGTGCcacaagtacagtggggcaaaaaagtatttagtcagccaccaattgtgcaagttctaccacttaaaaagatgagagaggcctgtaattttcatcataggtacacttcaactatgacagacaaaatgagaaaaaaaatccagaaaatcacat

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU1063894 True 265 lncRNA 0.39 2 272874 273180

Neighbor


gene id symbol gene type direction distance location
gars1 gars coding upstream 184523 63442 ~ 88351 (+)
cry-dash LOC106579757 coding downstream 67461 340641 ~ 378363 (+)
slc22a13b NA coding downstream 118932 392112 ~ 438530 (+)
LOC110535152 LOC106590691 coding downstream 212512 485692 ~ 542353 (+)
LOC118937458 LOC106594516 coding downstream 288254 561434 ~ 564576 (+)
LOC110536523 LOC106563098 coding downstream 302460 575640 ~ 604339 (+)
G933174 NA non-coding upstream 31236 241125 ~ 241638 (+)
G933162 NA non-coding upstream 59668 208120 ~ 213206 (+)
G933145 NA non-coding upstream 91870 180127 ~ 181004 (+)
G933117 NA non-coding upstream 131119 141341 ~ 141755 (+)
G933110 NA non-coding upstream 143072 129199 ~ 129802 (+)
G933202 NA non-coding downstream 37718 310898 ~ 311957 (+)
G933222 NA non-coding downstream 65118 338298 ~ 338586 (+)
G933225 NA non-coding downstream 71448 344628 ~ 344912 (+)
G933240 NA non-coding downstream 107966 381146 ~ 381378 (+)
G933245 NA non-coding downstream 116292 389472 ~ 389684 (+)
G933532 LOC106594516 other downstream 288473 539980 ~ 562659 (+)
G933679 NA other downstream 452007 725187 ~ 728205 (+)
G933799 NA other downstream 676351 949531 ~ 951584 (+)

Expression



Co-expression Network