G933222



Basic Information


Item Value
gene id G933222
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 338298 ~ 338586 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU1063942
gtacatatcttaTTGCACTTTTATATGAAATGACATTAAAATGATACCTGTTAGATTCCCATGCTATAGAGATTGTACTGATCCAGACAGTGGCTCATGACAAGGAGCAGTATGTATGTACTGTTGGGAATGACTGACTGGGCGTTAGATTGGAGCTTATTCGTAATGGAATCCTCCTATAGGATGACAAAGCCTCAAAACAAAGCCTCCTGTTGATATTTTGTACATGTATCATGTAGTTAGGCCTAATAAATCAAATGTCTAAGACCATGATGTGTCTATCTTTCTT

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU1063942 True 289 lncRNA 0.37 1 338298 338586

Neighbor


gene id symbol gene type direction distance location
dlec1 dlec1 coding upstream 30458 193352 ~ 307840 (+)
gars1 gars coding upstream 249947 63442 ~ 88351 (+)
cry-dash LOC106579757 coding downstream 2055 340641 ~ 378363 (+)
slc22a13b NA coding downstream 53526 392112 ~ 438530 (+)
LOC110535152 LOC106590691 coding downstream 147106 485692 ~ 542353 (+)
LOC118937458 LOC106594516 coding downstream 222848 561434 ~ 564576 (+)
LOC110536523 LOC106563098 coding downstream 237054 575640 ~ 604339 (+)
G933202 NA non-coding upstream 26341 310898 ~ 311957 (+)
G933185 NA non-coding upstream 65118 272874 ~ 273180 (+)
G933174 NA non-coding upstream 96660 241125 ~ 241638 (+)
G933162 NA non-coding upstream 125092 208120 ~ 213206 (+)
G933145 NA non-coding upstream 157294 180127 ~ 181004 (+)
G933225 NA non-coding downstream 6042 344628 ~ 344912 (+)
G933240 NA non-coding downstream 42560 381146 ~ 381378 (+)
G933245 NA non-coding downstream 50886 389472 ~ 389684 (+)
G933246 NA non-coding downstream 52185 390771 ~ 391077 (+)
G933258 NA non-coding downstream 64801 403387 ~ 405536 (+)
G933532 LOC106594516 other downstream 223067 539980 ~ 562659 (+)
G933679 NA other downstream 386601 725187 ~ 728205 (+)
G933799 NA other downstream 610945 949531 ~ 951584 (+)

Expression



Co-expression Network