G933225



Basic Information


Item Value
gene id G933225
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 344628 ~ 344912 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU1063946
aaactaggccctgtaggatctgccttgttgatagtgttgttaagaaggtagaaaccagggcctgtaggacctgccttgttgatagtgttgttaagaaggtagaaactagggcctgtaggacctgccttgttgatagtgttgttaagaaggtagaaaccagggcctgtaggacctgccttgttgatagtgttgttaagaaggtagaaactagggcctgtaggacctgccttgttg

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU1063946 True 234 lncRNA 0.47 2 344628 344912

Neighbor


gene id symbol gene type direction distance location
dlec1 dlec1 coding upstream 36788 193352 ~ 307840 (+)
gars1 gars coding upstream 256277 63442 ~ 88351 (+)
slc22a13b NA coding downstream 47200 392112 ~ 438530 (+)
LOC110535152 LOC106590691 coding downstream 140780 485692 ~ 542353 (+)
LOC118937458 LOC106594516 coding downstream 216522 561434 ~ 564576 (+)
LOC110536523 LOC106563098 coding downstream 230728 575640 ~ 604339 (+)
LOC110535151 LOC106579763 coding downstream 287211 632123 ~ 646961 (+)
G933222 NA non-coding upstream 6042 338298 ~ 338586 (+)
G933202 NA non-coding upstream 32671 310898 ~ 311957 (+)
G933185 NA non-coding upstream 71448 272874 ~ 273180 (+)
G933174 NA non-coding upstream 102990 241125 ~ 241638 (+)
G933162 NA non-coding upstream 131422 208120 ~ 213206 (+)
G933240 NA non-coding downstream 36234 381146 ~ 381378 (+)
G933245 NA non-coding downstream 44560 389472 ~ 389684 (+)
G933246 NA non-coding downstream 45859 390771 ~ 391077 (+)
G933258 NA non-coding downstream 58475 403387 ~ 405536 (+)
G933261 NA non-coding downstream 62429 407341 ~ 407956 (+)
G933532 LOC106594516 other downstream 216741 539980 ~ 562659 (+)
G933679 NA other downstream 380275 725187 ~ 728205 (+)
G933799 NA other downstream 604619 949531 ~ 951584 (+)

Expression



Co-expression Network