G933240



Basic Information


Item Value
gene id G933240
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 381146 ~ 381378 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU1063962
tccaattgtgtagtagctactatcttgtctcatggctacaactcccgtacgggctcgggagagacgaaggttgaaagtcatgcgtcctccgatacacaacccaaccaagccgcactgcgcccggcccgccacaggagtcgctggtgcgcgatgagacaaggatatccctaccggccaagccctccctaacctggacgacgctaggccaattgtgcgtcgccccacggacctcc

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU1063962 True 233 lncRNA 0.60 1 381146 381378

Neighbor


gene id symbol gene type direction distance location
cry-dash LOC106579757 coding upstream 2783 340641 ~ 378363 (+)
dlec1 dlec1 coding upstream 73306 193352 ~ 307840 (+)
gars1 gars coding upstream 292795 63442 ~ 88351 (+)
slc22a13b NA coding downstream 10734 392112 ~ 438530 (+)
LOC110535152 LOC106590691 coding downstream 104314 485692 ~ 542353 (+)
LOC118937458 LOC106594516 coding downstream 180056 561434 ~ 564576 (+)
LOC110536523 LOC106563098 coding downstream 194262 575640 ~ 604339 (+)
LOC110535151 LOC106579763 coding downstream 250745 632123 ~ 646961 (+)
G933225 NA non-coding upstream 36234 344628 ~ 344912 (+)
G933222 NA non-coding upstream 42560 338298 ~ 338586 (+)
G933202 NA non-coding upstream 69189 310898 ~ 311957 (+)
G933185 NA non-coding upstream 107966 272874 ~ 273180 (+)
G933174 NA non-coding upstream 139508 241125 ~ 241638 (+)
G933245 NA non-coding downstream 8094 389472 ~ 389684 (+)
G933246 NA non-coding downstream 9393 390771 ~ 391077 (+)
G933258 NA non-coding downstream 22009 403387 ~ 405536 (+)
G933261 NA non-coding downstream 25963 407341 ~ 407956 (+)
G933262 NA non-coding downstream 28558 409936 ~ 416487 (+)
G933532 LOC106594516 other downstream 180275 539980 ~ 562659 (+)
G933679 NA other downstream 343809 725187 ~ 728205 (+)
G933799 NA other downstream 568153 949531 ~ 951584 (+)

Expression



Co-expression Network