G933258


Basic Information

Item Value
gene id G933258
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 403387 ~ 405536 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1063984
ttatcatcactaacatccaggttatcatcactatcatactaacgtccaggttatcatcactatcatactaacatccagaaggttatcatcactatcatactgacatccaggttatcatcactatcgtactaacatccaggttatcatcaccatcatacaaacatccagcaggttattatcatcGCTATCATCCAggaggttatcatcactatcacactgacacccagcaggttattatcactgtcatactaacatccaggttatcatcactatcatactaacatccagcaggttattatcatcGCTATCATCCAagaggttatcatcactatcacaCTGACACCCAGCAGgttattatcactgtcatactgacatccaggttatcatcactatcatactaacatcaagcaggttagcatcactatcatactaacatccaggttatcatcactatcatactaacatccaggatatcatcactatcatactaacatccagcaggttattatcatcactatcatactaacatccaggaggttattatcactatcatactaacatccaggttatcatcactatcgtactaacatccaggttatcatcactatcatactaacatccatgAGGTTATTATCACTTTCACACTGACATCCAggaggttatcatcactatcatactgacatccaggttatcatctcTACAATACTAACATACAGCAGGTTATTATCACTATCATACTGACATCCAGGTTATCAGCGCTATCATACTAACATTCAGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1063984 True 778 lncRNA 0.38 3 403387 405536

Neighbor

gene id symbol gene type direction distance location
cry-dash LOC106579757 coding upstream 25024 340641 ~ 378363 (+)
dlec1 dlec1 coding upstream 95547 193352 ~ 307840 (+)
gars1 gars coding upstream 315036 63442 ~ 88351 (+)
LOC110535152 LOC106590691 coding downstream 80156 485692 ~ 542353 (+)
LOC118937458 LOC106594516 coding downstream 155898 561434 ~ 564576 (+)
LOC110536523 LOC106563098 coding downstream 170104 575640 ~ 604339 (+)
LOC110535151 LOC106579763 coding downstream 226587 632123 ~ 646961 (+)
LOC110535150 LOC106590688 coding downstream 336956 742492 ~ 859531 (+)
G933246 NA non-coding upstream 12310 390771 ~ 391077 (+)
G933245 NA non-coding upstream 13703 389472 ~ 389684 (+)
G933240 NA non-coding upstream 22009 381146 ~ 381378 (+)
G933225 NA non-coding upstream 58475 344628 ~ 344912 (+)
G933222 NA non-coding upstream 64801 338298 ~ 338586 (+)
G933261 NA non-coding downstream 1805 407341 ~ 407956 (+)
G933262 NA non-coding downstream 4400 409936 ~ 416487 (+)
G933264 NA non-coding downstream 7527 413063 ~ 415404 (+)
G933274 NA non-coding downstream 27460 432996 ~ 433447 (+)
slc22a13b NA non-coding downstream 31450 392112 ~ 438530 (+)
G933532 LOC106594516 other downstream 156117 539980 ~ 562659 (+)
G933679 NA other downstream 319651 725187 ~ 728205 (+)
G933799 NA other downstream 543995 949531 ~ 951584 (+)

Expression


Co-expression Network