G933262


Basic Information

Item Value
gene id G933262
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 409936 ~ 416487 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1063991
ctattatactgacatccagcaggttattatcactatcatactaacatccaggttatcatcactatcatactgacaTCCAGGAGGTTactatcactatcatactaacatccaggttatcatcactatcatactaacatccatgAGGTTATTATCACTTTCACACTGACATCCAggaggttatcatcactatcatactaacatccaggttatcatcactatcatactaacatccagcaggttattatcactatcatactaacatcc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1063991 True 264 lncRNA 0.36 3 409936 416487

Neighbor

gene id symbol gene type direction distance location
cry-dash LOC106579757 coding upstream 31573 340641 ~ 378363 (+)
dlec1 dlec1 coding upstream 102096 193352 ~ 307840 (+)
gars1 gars coding upstream 321585 63442 ~ 88351 (+)
LOC110535152 LOC106590691 coding downstream 69205 485692 ~ 542353 (+)
LOC118937458 LOC106594516 coding downstream 144947 561434 ~ 564576 (+)
LOC110536523 LOC106563098 coding downstream 159153 575640 ~ 604339 (+)
LOC110535151 LOC106579763 coding downstream 215636 632123 ~ 646961 (+)
LOC110535150 LOC106590688 coding downstream 326005 742492 ~ 859531 (+)
G933261 NA non-coding upstream 1980 407341 ~ 407956 (+)
G933258 NA non-coding upstream 4400 403387 ~ 405536 (+)
G933246 NA non-coding upstream 18859 390771 ~ 391077 (+)
G933245 NA non-coding upstream 20252 389472 ~ 389684 (+)
G933240 NA non-coding upstream 28558 381146 ~ 381378 (+)
G933274 NA non-coding downstream 16509 432996 ~ 433447 (+)
slc22a13b NA non-coding downstream 20499 392112 ~ 438530 (+)
G933287 NA non-coding downstream 42863 459350 ~ 459708 (+)
G933520 NA non-coding downstream 55062 471549 ~ 471782 (+)
G933522 NA non-coding downstream 56829 473316 ~ 473542 (+)
G933532 LOC106594516 other downstream 145166 539980 ~ 562659 (+)
G933679 NA other downstream 308700 725187 ~ 728205 (+)
G933799 NA other downstream 533044 949531 ~ 951584 (+)

Expression


Co-expression Network