G933274


Basic Information

Item Value
gene id G933274
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 432996 ~ 433447 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1064003
ccaggtcgatgaagacggctgcacagtgctgtcttttattgatggcggttttgATATCGCTTAGGACCttgggtctagagtgtctccccctttgaagagggggatgaccgcaggaGCTTTCCAATATTTGGGGATCAcagatgatatgaaagagaggatgaacaggctagtaatagtggTTGCAATAATTTCTGCGGataagagagggtccagattgtccagcccagctgatatGTAGGGGTCCGGGTTTTGCAGCTCTTACAGAACATCGGCTGTCTTGATTTCGGTGCAggag

Function

NR:

description
unnamed protein product

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU1064003 True 295 lncRNA 0.49 2 432996 433447

Neighbor

gene id symbol gene type direction distance location
cry-dash LOC106579757 coding upstream 54633 340641 ~ 378363 (+)
dlec1 dlec1 coding upstream 125156 193352 ~ 307840 (+)
gars1 gars coding upstream 344645 63442 ~ 88351 (+)
LOC110535152 LOC106590691 coding downstream 52245 485692 ~ 542353 (+)
LOC118937458 LOC106594516 coding downstream 127987 561434 ~ 564576 (+)
LOC110536523 LOC106563098 coding downstream 142193 575640 ~ 604339 (+)
LOC110535151 LOC106579763 coding downstream 198676 632123 ~ 646961 (+)
LOC110535150 LOC106590688 coding downstream 309045 742492 ~ 859531 (+)
G933262 NA non-coding upstream 16509 409936 ~ 416487 (+)
G933264 NA non-coding upstream 17592 413063 ~ 415404 (+)
G933261 NA non-coding upstream 25040 407341 ~ 407956 (+)
G933258 NA non-coding upstream 27460 403387 ~ 405536 (+)
G933246 NA non-coding upstream 41919 390771 ~ 391077 (+)
slc22a13b NA non-coding downstream 3539 392112 ~ 438530 (+)
G933287 NA non-coding downstream 25903 459350 ~ 459708 (+)
G933520 NA non-coding downstream 38102 471549 ~ 471782 (+)
G933522 NA non-coding downstream 39869 473316 ~ 473542 (+)
G933524 NA non-coding downstream 44147 477594 ~ 477935 (+)
G933532 LOC106594516 other downstream 128206 539980 ~ 562659 (+)
G933679 NA other downstream 291740 725187 ~ 728205 (+)
G933799 NA other downstream 516084 949531 ~ 951584 (+)

Expression


Co-expression Network