G933520


Basic Information

Item Value
gene id G933520
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 471549 ~ 471782 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1064288
tacactgctcaaaaaaataatgggaacacttaaacaacacaatgtaactccaagtcaatcacacttctgtgaaatcaaactgtccacttaggaagcaacactgattgacaataaatttcacatgctgttgtgcaaatggaatagacagcaggtggaaattataggtaattagcaagacacccccaataaaggagtggttctgcaggtggtgaccacagaccacttctcatttcc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1064288 True 234 lncRNA 0.40 1 471549 471782

Neighbor

gene id symbol gene type direction distance location
slc22a13b NA coding upstream 33019 392112 ~ 438530 (+)
cry-dash LOC106579757 coding upstream 93186 340641 ~ 378363 (+)
dlec1 dlec1 coding upstream 163709 193352 ~ 307840 (+)
gars1 gars coding upstream 383198 63442 ~ 88351 (+)
LOC110535152 LOC106590691 coding downstream 13910 485692 ~ 542353 (+)
LOC118937458 LOC106594516 coding downstream 89652 561434 ~ 564576 (+)
LOC110536523 LOC106563098 coding downstream 103858 575640 ~ 604339 (+)
LOC110535151 LOC106579763 coding downstream 160341 632123 ~ 646961 (+)
LOC110535150 LOC106590688 coding downstream 270710 742492 ~ 859531 (+)
G933287 NA non-coding upstream 11841 459350 ~ 459708 (+)
G933274 NA non-coding upstream 38102 432996 ~ 433447 (+)
G933262 NA non-coding upstream 55062 409936 ~ 416487 (+)
G933264 NA non-coding upstream 56145 413063 ~ 415404 (+)
G933522 NA non-coding downstream 1534 473316 ~ 473542 (+)
G933524 NA non-coding downstream 5812 477594 ~ 477935 (+)
G933545 NA non-coding downstream 36267 508049 ~ 511773 (+)
G933552 NA non-coding downstream 47114 518896 ~ 523618 (+)
G933560 NA non-coding downstream 60526 532308 ~ 578651 (+)
G933532 LOC106594516 other downstream 89871 539980 ~ 562659 (+)
G933679 NA other downstream 253405 725187 ~ 728205 (+)
G933799 NA other downstream 477749 949531 ~ 951584 (+)

Expression


Co-expression Network