G933524


Basic Information

Item Value
gene id G933524
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 477594 ~ 477935 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1064292
cttaaacagagcttctttaataaccaaacataggtaggctcagatagaccggcagattccgacaggacaggacaaggttacagcaaacatgacgatagtctggctcaggcatgaaacacaacaaacaagaatccgacaaggacaggaacaaaaacagagagagatataggggactaatcagagggaaaaggggaacaggtgggagaaggggtgacgaggtagtcaagaggagacaaggaacagctgggggaaagcgggggagaaaaggtaacctaatacgaccagcagagggagacagggtgaaaggaaaggacagaaagacacaacatgacagtacatgac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1064292 True 342 lncRNA 0.48 1 477594 477935

Neighbor

gene id symbol gene type direction distance location
slc22a13b NA coding upstream 39064 392112 ~ 438530 (+)
cry-dash LOC106579757 coding upstream 99231 340641 ~ 378363 (+)
dlec1 dlec1 coding upstream 169754 193352 ~ 307840 (+)
gars1 gars coding upstream 389243 63442 ~ 88351 (+)
LOC110535152 LOC106590691 coding downstream 7757 485692 ~ 542353 (+)
LOC118937458 LOC106594516 coding downstream 83499 561434 ~ 564576 (+)
LOC110536523 LOC106563098 coding downstream 97705 575640 ~ 604339 (+)
LOC110535151 LOC106579763 coding downstream 154188 632123 ~ 646961 (+)
LOC110535150 LOC106590688 coding downstream 264557 742492 ~ 859531 (+)
G933522 NA non-coding upstream 4052 473316 ~ 473542 (+)
G933520 NA non-coding upstream 5812 471549 ~ 471782 (+)
G933287 NA non-coding upstream 17886 459350 ~ 459708 (+)
G933274 NA non-coding upstream 44147 432996 ~ 433447 (+)
G933545 NA non-coding downstream 30114 508049 ~ 511773 (+)
G933552 NA non-coding downstream 40961 518896 ~ 523618 (+)
G933560 NA non-coding downstream 54373 532308 ~ 578651 (+)
G933532 LOC106594516 non-coding downstream 62045 539980 ~ 562659 (+)
G933533 NA non-coding downstream 66644 544579 ~ 567355 (+)
G933679 NA other downstream 247252 725187 ~ 728205 (+)
G933799 NA other downstream 471596 949531 ~ 951584 (+)

Expression


Co-expression Network