G933545


Basic Information

Item Value
gene id G933545
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 508049 ~ 511773 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1064318
gtgtgactgggctcatactactgttctgtctgtctgactgggctcatactactgttctgtctgtctgactgggctcgtactactgttctgtctgtctgactgggcttgtactactgttctgtctgtctgtctgactgggctcgtactactgttctctctgtctgtctgactgggctcgTACTACCATCACGTTCTGTCTGTGTGACCAGTGCCGCTCAGACAGTTTAGCAGACTGATAAACCTCAGATTGACTAGGAAGCAGGGATTAACCTCAGCCATTGTTTCTGCCTATAATCAGTTTGTCAGGTAGACTTACtgtagtcagtcagtctggagAATATGACACACTTCTGACACCAtggtccccctccctcc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1064318 True 375 lncRNA 0.49 2 508049 511773

Neighbor

gene id symbol gene type direction distance location
slc22a13b NA coding upstream 69519 392112 ~ 438530 (+)
cry-dash LOC106579757 coding upstream 129686 340641 ~ 378363 (+)
dlec1 dlec1 coding upstream 200209 193352 ~ 307840 (+)
gars1 gars coding upstream 419698 63442 ~ 88351 (+)
LOC118937458 LOC106594516 coding downstream 49661 561434 ~ 564576 (+)
LOC110536523 LOC106563098 coding downstream 63867 575640 ~ 604339 (+)
LOC110535151 LOC106579763 coding downstream 120350 632123 ~ 646961 (+)
LOC110535150 LOC106590688 coding downstream 230719 742492 ~ 859531 (+)
fam162a e2ig5 coding downstream 841216 1352989 ~ 1364272 (+)
G933524 NA non-coding upstream 30114 477594 ~ 477935 (+)
G933522 NA non-coding upstream 34507 473316 ~ 473542 (+)
G933520 NA non-coding upstream 36267 471549 ~ 471782 (+)
G933287 NA non-coding upstream 48341 459350 ~ 459708 (+)
G933552 NA non-coding downstream 7123 518896 ~ 523618 (+)
G933560 NA non-coding downstream 20535 532308 ~ 578651 (+)
G933532 LOC106594516 non-coding downstream 28207 539980 ~ 562659 (+)
G933533 NA non-coding downstream 32806 544579 ~ 567355 (+)
G933679 NA other downstream 213414 725187 ~ 728205 (+)
G933799 NA other downstream 437758 949531 ~ 951584 (+)
G934169 NA other downstream 795754 1307527 ~ 1307759 (+)

Expression


Co-expression Network