G933552


Basic Information

Item Value
gene id G933552
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 518896 ~ 523618 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1064325
GACTCCTGGTCTCAGCTGATGGGATGCTAATGGTGAAGACTCCTGGTCTCAGCTAATGGGGTGCTAGTCATGAAGACTCCTGGTCTCAGCTGATGGGGTGTTAGTGGTGAAGACTCCTGGTCTCAGCTGATGGATGTTAGTGGTGAAGACTCCTGGTCTCAGCTGATTGGATGGTAGTGGTGAAGACTCCTGGTCTCAGCTGATGGATGTTAGTGGTGAAGACTCCTGGTCTCAGCTGATGGGATGGTAGTGGTGAAGACTCCGACTCCTGGTCTCAGCTGATGGGATGTTAGTGGTGAAGACTCCTGGTCTCAGCTGATGGGATGCTAGTGGTGAAGACTCCTGGTCTCAGCTGATGGGATGTTAGTGGTGAAGACTCCTGGTCTCAGCTGATTGGATGTTAGTGGTGAAGACTCCTGGTCTCAGCTGATGGGCTGTTAGTGGTGAAGACTCCTGGTCTCAGCTGATGGGATTTTAGTGGTGAAGACTCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1064325 True 491 lncRNA 0.52 3 518896 523618

Neighbor

gene id symbol gene type direction distance location
slc22a13b NA coding upstream 80366 392112 ~ 438530 (+)
cry-dash LOC106579757 coding upstream 140533 340641 ~ 378363 (+)
dlec1 dlec1 coding upstream 211056 193352 ~ 307840 (+)
gars1 gars coding upstream 430545 63442 ~ 88351 (+)
LOC118937458 LOC106594516 coding downstream 37816 561434 ~ 564576 (+)
LOC110536523 LOC106563098 coding downstream 52022 575640 ~ 604339 (+)
LOC110535151 LOC106579763 coding downstream 108505 632123 ~ 646961 (+)
LOC110535150 LOC106590688 coding downstream 218874 742492 ~ 859531 (+)
fam162a e2ig5 coding downstream 829371 1352989 ~ 1364272 (+)
G933545 NA non-coding upstream 7123 508049 ~ 511773 (+)
G933524 NA non-coding upstream 40961 477594 ~ 477935 (+)
G933522 NA non-coding upstream 45354 473316 ~ 473542 (+)
G933520 NA non-coding upstream 47114 471549 ~ 471782 (+)
G933287 NA non-coding upstream 59188 459350 ~ 459708 (+)
G933560 NA non-coding downstream 8690 532308 ~ 578651 (+)
G933532 LOC106594516 non-coding downstream 16362 539980 ~ 562659 (+)
G933533 NA non-coding downstream 20961 544579 ~ 567355 (+)
G933583 NA non-coding downstream 57900 581518 ~ 595816 (+)
G933679 NA other downstream 201569 725187 ~ 728205 (+)
G933799 NA other downstream 425913 949531 ~ 951584 (+)
G934169 NA other downstream 783909 1307527 ~ 1307759 (+)

Expression


Co-expression Network