G933560


Basic Information

Item Value
gene id G933560
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 532308 ~ 578651 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1064334
gggatgttctctgtttagtgagtcctccacatcagagacagtagagatgaccagggatgttctctgtttagtgagtcctccagatcagaggcagtagggatgaccaggatgttctctgtttagtgagtcctccagatcagagacagtagggatgaccaggatgttctctgtttagtgagtcctccagatcagaggcagtagggatgaccagggatgttctctgtttagtgagtcctccagatcagagacagtagggacgaccagggatgttctctgtttagtgagtcctccagatcagaggcagtagggatgaccagggatgttctctgtttagtgagtcctctagatcagaggcagtagagatgaccagggatgttctctgtttagtgagtcctcaagaccagaggcagtagggatgaccagggatgttctctgtttagtgagtcctccagatcagtagggatgaccagggatgttctctgtttagtgagtcctccagatcagtagggatgaccagggatgttctctgtttagtgagtcctccagaccagaggcagtag

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1064334 True 560 lncRNA 0.50 3 532308 578651

Neighbor

gene id symbol gene type direction distance location
slc22a13b NA coding upstream 93778 392112 ~ 438530 (+)
cry-dash LOC106579757 coding upstream 153945 340641 ~ 378363 (+)
dlec1 dlec1 coding upstream 224468 193352 ~ 307840 (+)
gars1 gars coding upstream 443957 63442 ~ 88351 (+)
LOC110535151 LOC106579763 coding downstream 53472 632123 ~ 646961 (+)
LOC110535150 LOC106590688 coding downstream 163841 742492 ~ 859531 (+)
fam162a e2ig5 coding downstream 774338 1352989 ~ 1364272 (+)
nktr nktr coding downstream 810722 1389373 ~ 1479628 (+)
LOC110535167 LOC106579754 coding downstream 1264513 1839051 ~ 1855581 (+)
G933552 NA non-coding upstream 8690 518896 ~ 523618 (+)
G933545 NA non-coding upstream 20535 508049 ~ 511773 (+)
G933524 NA non-coding upstream 54373 477594 ~ 477935 (+)
G933522 NA non-coding upstream 58766 473316 ~ 473542 (+)
G933520 NA non-coding upstream 60526 471549 ~ 471782 (+)
G933583 NA non-coding downstream 2867 581518 ~ 595816 (+)
G933585 NA non-coding downstream 5742 584393 ~ 589797 (+)
G933586 NA non-coding downstream 26027 604678 ~ 608464 (+)
G933576 NA non-coding downstream 31806 610457 ~ 611537 (+)
G933635 NA non-coding downstream 34613 613264 ~ 613590 (+)
LOC110536523 LOC106563098 other downstream 17672 575640 ~ 604339 (+)
G933679 NA other downstream 146536 725187 ~ 728205 (+)
G933799 NA other downstream 370880 949531 ~ 951584 (+)
G934169 NA other downstream 728876 1307527 ~ 1307759 (+)
G934256 NA other downstream 909425 1488076 ~ 1496014 (+)

Expression


Co-expression Network