G933583


Basic Information

Item Value
gene id G933583
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 581518 ~ 595816 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1064360
TTGGGACAGAGGGATTCATTAACACCAGACTGGTGAGTTATGGGGACAGAGGGATTCATTAACACCAGACTGGTGAGTTATTGGGACAGAGGGATTCATTAACACCAGACTGGTGTGTTATGGAGACAGAAGGATTCATTAACACCAGACTGGTGAGTTATGGGGACAGAGGGATTCATTAACACCAGACTGGTGAGTTATGGGGACAGAGGGATTcattaacaccagactggtaagtTATGGAGACAGAGGGATTCATtaggtgtgtgggtactgtcactgtttctttatgaacaggtttGTGGGTACTATCACtgtgtctttatgaacaggtgtgtgggtactatcactgtttctttatgaacaggtgtgtgggtacctgtcactgtgtctttatgaacaggtgtgtgggtactgtcactgtttctttatgaacaggtatgtgggtactgtcact

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1064360 True 457 lncRNA 0.44 3 581518 595816

Neighbor

gene id symbol gene type direction distance location
LOC118937458 LOC106594516 coding upstream 16942 561434 ~ 564576 (+)
LOC110535152 LOC106590691 coding upstream 39165 485692 ~ 542353 (+)
slc22a13b NA coding upstream 142988 392112 ~ 438530 (+)
cry-dash LOC106579757 coding upstream 203155 340641 ~ 378363 (+)
dlec1 dlec1 coding upstream 273678 193352 ~ 307840 (+)
LOC110535151 LOC106579763 coding downstream 36307 632123 ~ 646961 (+)
LOC110535150 LOC106590688 coding downstream 146676 742492 ~ 859531 (+)
fam162a e2ig5 coding downstream 757173 1352989 ~ 1364272 (+)
nktr nktr coding downstream 793557 1389373 ~ 1479628 (+)
LOC110535167 LOC106579754 coding downstream 1247348 1839051 ~ 1855581 (+)
G933560 NA non-coding upstream 2867 532308 ~ 578651 (+)
G933533 NA non-coding upstream 14163 544579 ~ 567355 (+)
G933532 LOC106594516 non-coding upstream 18859 539980 ~ 562659 (+)
G933552 NA non-coding upstream 57900 518896 ~ 523618 (+)
G933545 NA non-coding upstream 69745 508049 ~ 511773 (+)
G933586 NA non-coding downstream 8862 604678 ~ 608464 (+)
G933576 NA non-coding downstream 14641 610457 ~ 611537 (+)
G933635 NA non-coding downstream 17448 613264 ~ 613590 (+)
G933636 NA non-coding downstream 17941 613757 ~ 614019 (+)
G933639 NA non-coding downstream 20606 616422 ~ 616648 (+)
LOC110536523 LOC106563098 other downstream 507 575640 ~ 604339 (+)
G933679 NA other downstream 129371 725187 ~ 728205 (+)
G933799 NA other downstream 353715 949531 ~ 951584 (+)
G934169 NA other downstream 711711 1307527 ~ 1307759 (+)
G934256 NA other downstream 892260 1488076 ~ 1496014 (+)

Expression


Co-expression Network