Gene
RNA
| Item | Value |
|---|---|
| gene id | G933585 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048575.1 |
| NCBI id | CM023229.2 |
| chromosome length | 86280908 |
| location | 584393 ~ 589797 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1064363 | False | 312 | lncRNA | 0.42 | 2 | 584393 | 589797 |
| TU1064364 | True | 326 | lncRNA | 0.42 | 2 | 589043 | 589797 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118937458 | LOC106594516 | coding | upstream | 19817 | 561434 ~ 564576 (+) |
| LOC110535152 | LOC106590691 | coding | upstream | 42040 | 485692 ~ 542353 (+) |
| slc22a13b | NA | coding | upstream | 145863 | 392112 ~ 438530 (+) |
| cry-dash | LOC106579757 | coding | upstream | 206030 | 340641 ~ 378363 (+) |
| dlec1 | dlec1 | coding | upstream | 276553 | 193352 ~ 307840 (+) |
| LOC110535151 | LOC106579763 | coding | downstream | 42326 | 632123 ~ 646961 (+) |
| LOC110535150 | LOC106590688 | coding | downstream | 152695 | 742492 ~ 859531 (+) |
| fam162a | e2ig5 | coding | downstream | 763192 | 1352989 ~ 1364272 (+) |
| nktr | nktr | coding | downstream | 799576 | 1389373 ~ 1479628 (+) |
| LOC110535167 | LOC106579754 | coding | downstream | 1253367 | 1839051 ~ 1855581 (+) |
| G933560 | NA | non-coding | upstream | 5742 | 532308 ~ 578651 (+) |
| G933533 | NA | non-coding | upstream | 17038 | 544579 ~ 567355 (+) |
| G933532 | LOC106594516 | non-coding | upstream | 21734 | 539980 ~ 562659 (+) |
| G933552 | NA | non-coding | upstream | 60775 | 518896 ~ 523618 (+) |
| G933545 | NA | non-coding | upstream | 72620 | 508049 ~ 511773 (+) |
| G933586 | NA | non-coding | downstream | 14881 | 604678 ~ 608464 (+) |
| G933576 | NA | non-coding | downstream | 20660 | 610457 ~ 611537 (+) |
| G933635 | NA | non-coding | downstream | 23467 | 613264 ~ 613590 (+) |
| G933636 | NA | non-coding | downstream | 23960 | 613757 ~ 614019 (+) |
| G933639 | NA | non-coding | downstream | 26625 | 616422 ~ 616648 (+) |
| LOC110536523 | LOC106563098 | other | downstream | 6526 | 575640 ~ 604339 (+) |
| G933679 | NA | other | downstream | 135390 | 725187 ~ 728205 (+) |
| G933799 | NA | other | downstream | 359734 | 949531 ~ 951584 (+) |
| G934169 | NA | other | downstream | 717730 | 1307527 ~ 1307759 (+) |
| G934256 | NA | other | downstream | 898279 | 1488076 ~ 1496014 (+) |
