G933639


Basic Information

Item Value
gene id G933639
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 616422 ~ 616648 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1064430
aggcagcaggctgttaaccagcctgccagcttagtggagtctggcacagtcagtgtagtcagctcagctttcccaattgagaccgtgtctgtgcctcgatctaggttgggcaaaacgaaacatggcggtgttcgccttagcaatctcactaggataaagacctcctccattcttgTCATTTTTGAAAGAGATTGTGAAATCTCACATCTTCATAggactacttaatg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1064430 True 227 lncRNA 0.47 1 616422 616648

Neighbor

gene id symbol gene type direction distance location
LOC110536523 LOC106563098 coding upstream 12083 575640 ~ 604339 (+)
LOC118937458 LOC106594516 coding upstream 51846 561434 ~ 564576 (+)
LOC110535152 LOC106590691 coding upstream 74069 485692 ~ 542353 (+)
slc22a13b NA coding upstream 177892 392112 ~ 438530 (+)
cry-dash LOC106579757 coding upstream 238059 340641 ~ 378363 (+)
LOC110535151 LOC106579763 coding downstream 15475 632123 ~ 646961 (+)
LOC110535150 LOC106590688 coding downstream 125844 742492 ~ 859531 (+)
fam162a e2ig5 coding downstream 736341 1352989 ~ 1364272 (+)
nktr nktr coding downstream 772725 1389373 ~ 1479628 (+)
LOC110535167 LOC106579754 coding downstream 1226516 1839051 ~ 1855581 (+)
G933636 NA non-coding upstream 2403 613757 ~ 614019 (+)
G933635 NA non-coding upstream 2832 613264 ~ 613590 (+)
G933576 NA non-coding upstream 4885 610457 ~ 611537 (+)
G933586 NA non-coding upstream 7958 604678 ~ 608464 (+)
G933583 NA non-coding upstream 20606 581518 ~ 595816 (+)
G933647 NA non-coding downstream 4738 621386 ~ 621671 (+)
G933650 NA non-coding downstream 8517 625165 ~ 625398 (+)
G933676 NA non-coding downstream 31204 647852 ~ 648073 (+)
G933677 NA non-coding downstream 34940 651588 ~ 652256 (+)
G933684 NA non-coding downstream 121569 738217 ~ 738520 (+)
G933532 LOC106594516 other upstream 53763 539980 ~ 562659 (+)
G933679 NA other downstream 108539 725187 ~ 728205 (+)
G933799 NA other downstream 332883 949531 ~ 951584 (+)
G934169 NA other downstream 690879 1307527 ~ 1307759 (+)
G934256 NA other downstream 871428 1488076 ~ 1496014 (+)
G934579 NA other downstream 1209979 1826627 ~ 1827366 (+)

Expression


Co-expression Network