G933677


Basic Information

Item Value
gene id G933677
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 651588 ~ 652256 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1064474
ctctactggctgtactgggtagagaggaaccaggttctgaggggtgaccagtcctctactggctgtactgggtagagaggaaccaggttctgaggggtgaccagtcctctactggctgtactgggtagagaggaaccaggctctgaggggtgaccagtcctctactggctgtactgggtagagaggaaccaggctctgaggggtgaccagtcctctattggctgtactgggtagagaggaaccaggctctgaggggtggccagtcctctactggctgtactgggtagagaggaac

Function

NR:

description
PREDICTED: uncharacterized protein LOC106588115

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU1064474 True 295 lncRNA 0.57 2 651588 652256

Neighbor

gene id symbol gene type direction distance location
LOC110535151 LOC106579763 coding upstream 4627 632123 ~ 646961 (+)
LOC110536523 LOC106563098 coding upstream 47249 575640 ~ 604339 (+)
LOC118937458 LOC106594516 coding upstream 87012 561434 ~ 564576 (+)
LOC110535152 LOC106590691 coding upstream 109235 485692 ~ 542353 (+)
slc22a13b NA coding upstream 213058 392112 ~ 438530 (+)
LOC110535150 LOC106590688 coding downstream 90236 742492 ~ 859531 (+)
fam162a e2ig5 coding downstream 700733 1352989 ~ 1364272 (+)
nktr nktr coding downstream 737117 1389373 ~ 1479628 (+)
LOC110535167 LOC106579754 coding downstream 1190908 1839051 ~ 1855581 (+)
si:ch73-206p6.1 LOC106579752 coding downstream 1724445 2376701 ~ 2387592 (+)
G933676 NA non-coding upstream 3515 647852 ~ 648073 (+)
G933650 NA non-coding upstream 26190 625165 ~ 625398 (+)
G933647 NA non-coding upstream 29917 621386 ~ 621671 (+)
G933639 NA non-coding upstream 34940 616422 ~ 616648 (+)
G933636 NA non-coding upstream 37569 613757 ~ 614019 (+)
G933684 NA non-coding downstream 85961 738217 ~ 738520 (+)
G933686 NA non-coding downstream 86458 738714 ~ 739320 (+)
G933718 NA non-coding downstream 124120 776376 ~ 776878 (+)
G933755 NA non-coding downstream 198017 850273 ~ 851515 (+)
G933692 NA non-coding downstream 213626 865882 ~ 873581 (+)
G933532 LOC106594516 other upstream 88929 539980 ~ 562659 (+)
G933679 NA other downstream 72931 725187 ~ 728205 (+)
G933799 NA other downstream 297275 949531 ~ 951584 (+)
G934169 NA other downstream 655271 1307527 ~ 1307759 (+)
G934256 NA other downstream 835820 1488076 ~ 1496014 (+)
G934579 NA other downstream 1174371 1826627 ~ 1827366 (+)

Expression


Co-expression Network