XLOC_028499


Basic Information

Item Value
gene id XLOC_028499
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007115.7
NCBI id CM002888.2
chromosome length 78093715
location 7557414 ~ 7566507 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00057323
AGACgctgcactcaatggagctagttaCGTCattgtgaggggtggggttaggggtgCGCTTTAAAGCGCAGATCCCATTCGCTCCACTAGGCGGAATCAGCGAGCTGCTCTTTTAGCCTGAACACCTTTGACAACAGCAACACCAGATCAGCACAGGTACACCGTTTTACTGGCGTCAAGTTGAGCTCCAGTAGCAGATGACAGCTCAGTGACAGACTCAtaatgtcagtcaacagcagatATTACAGCCCGACAGCGAAGAAAAGCCACACCAAGTGCAGAAATGGAGAGTAACGCGACTCACCTGTAAGGGACTTTGCTTCGTTGGTTTAGTTTGTAGTGATGTTGTtgtagtgtttgtgttcagtcattgctctctctctctctctcctctgcagcagtgaagatacacacgtgtgtctgttgtgtttctgcTGCAGATATTTGAGCTGCGCTCAACAGCTGACGCTCCTCCACacgctcctccacatccaggcggattcacagctccaggaaagCTCACACACAGGTCAGCAGTCCAACATCAGTTCCAGCAAGTGTTCAGACATGGAGATCTGTGGCTATGTGGTAAGAGCACTGCCCCATGGCTTcaggggttgctggttcaaggccagccagaactctgcgatatgagtgaatgGAGAGATTTTCTGTCTTACTGTAAGGCAGGGAGATCCACCAGCGAACTCAATGCCAGTGTGAAGCCCTCCTGCCGCAGAACCACAAACTATCTccagtaaattattttaatttcattgaaTCTGCGGCTCAGAGTCTTCTCTTGATCTGACACAGCAGTCGTTTTGGTCTCAACTGTTCATTTCCCTCCTAACAAtgtcaaaataattattaaagcaTATACTCAATCATCTAATCATTCATGGGTCATTATTTGTGCTCACTTTATATTGAACTTCAGCACAAATGCTTGATTAACAATGTGGAAATATCAAACCAATACGAATGTAATGTGAAACCTGAATATTAGCCTGTAGGTAATTAATGCGCCACTCATCAATAAAGACACATAGAACTTGTTTGACGAGCTCTTATATTGGGGATGCAGAATGTCTTCATTGCTTACAGATTTA

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00057323 True 1112 lncRNA 0.45 3 7557414 7566507

Neighbor

gene id symbol gene type direction distance location
XLOC_028498 NA coding downstream 11297 7538015 ~ 7546117 (-)
XLOC_028497 si:ch211-170p16.1 coding downstream 325934 7229236 ~ 7231480 (-)
XLOC_028496 CR354372.1 coding downstream 335047 7222080 ~ 7222367 (-)
XLOC_028495 lrrn3b coding downstream 344539 7210755 ~ 7212875 (-)
XLOC_028494 FO681358.2 coding downstream 372103 7185195 ~ 7185311 (-)
XLOC_028500 NA coding upstream 12354 7578861 ~ 7581433 (-)
XLOC_028501 NA coding upstream 31703 7598210 ~ 7653189 (-)
XLOC_028502 NA coding upstream 78594 7645101 ~ 7648229 (-)
XLOC_028503 lta4h coding upstream 87100 7653607 ~ 7673165 (-)
XLOC_028504 BX649411.3 coding upstream 113472 7679979 ~ 7680095 (-)
XLOC_028493 NA non-coding downstream 533117 7020450 ~ 7024297 (-)
XLOC_028491 NA non-coding downstream 976867 6576777 ~ 6580547 (-)
XLOC_028508 NA non-coding upstream 405175 7971682 ~ 7973335 (-)

Expression


Co-expression Network