G933686


Basic Information

Item Value
gene id G933686
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 738714 ~ 739320 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1064483
ggacacgtctggcactgcaggatttgagtccctggcggcgtagtgtgttattgatggtaggctttgttactttggtcccagctctctgcaggtcattcactaggtccccccgtgtggttctgagatttttgctcaccgttcttgtgatcattttgaccccacggggtgagatcttgcgtggagccccagatcgagggagattatcagtggtcttgtatgtcttcaatttcctaataattgctcccacagttgatttcttcaaaccaagctgcttacctattgcagattcagtcttcccagcctggtgcaggtctacaattttgtttctggtgtcctttgacagctctttggtcttggccatagtggagtttggagtgtgactgtttgaggttgtggacaggtgtcttttatactgataacaagttcaaacaggtgccattaatacaggtaacgagtggaggacagaggaccgTCTTAAAGAAGAagctacaggtctgtgagagccagaaatcttgcttgtttgtaggtggccaaatacttattttccaccataatttgcaaataaattcataaaaaatcatacaatgtgattttctggaattttttt

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1064483 True 607 lncRNA 0.44 1 738714 739320

Neighbor

gene id symbol gene type direction distance location
LOC110535151 LOC106579763 coding upstream 91753 632123 ~ 646961 (+)
LOC110536523 LOC106563098 coding upstream 134375 575640 ~ 604339 (+)
LOC118937458 LOC106594516 coding upstream 174138 561434 ~ 564576 (+)
LOC110535152 LOC106590691 coding upstream 196361 485692 ~ 542353 (+)
slc22a13b NA coding upstream 300184 392112 ~ 438530 (+)
LOC110535150 LOC106590688 coding downstream 3172 742492 ~ 859531 (+)
fam162a e2ig5 coding downstream 613669 1352989 ~ 1364272 (+)
nktr nktr coding downstream 650053 1389373 ~ 1479628 (+)
LOC110535167 LOC106579754 coding downstream 1103844 1839051 ~ 1855581 (+)
si:ch73-206p6.1 LOC106579752 coding downstream 1637381 2376701 ~ 2387592 (+)
G933684 NA non-coding upstream 194 738217 ~ 738520 (+)
G933677 NA non-coding upstream 86458 651588 ~ 652256 (+)
G933676 NA non-coding upstream 90641 647852 ~ 648073 (+)
G933650 NA non-coding upstream 113316 625165 ~ 625398 (+)
G933647 NA non-coding upstream 117043 621386 ~ 621671 (+)
G933718 NA non-coding downstream 37056 776376 ~ 776878 (+)
G933755 NA non-coding downstream 110953 850273 ~ 851515 (+)
G933692 NA non-coding downstream 126562 865882 ~ 873581 (+)
G933762 NA non-coding downstream 134401 873721 ~ 875058 (+)
G933765 LOC106579760 non-coding downstream 143313 882633 ~ 889992 (+)
G933679 NA other upstream 10509 725187 ~ 728205 (+)
G933532 LOC106594516 other upstream 176055 539980 ~ 562659 (+)
G933799 NA other downstream 210211 949531 ~ 951584 (+)
G934169 NA other downstream 568207 1307527 ~ 1307759 (+)
G934256 NA other downstream 748756 1488076 ~ 1496014 (+)
G934579 NA other downstream 1087307 1826627 ~ 1827366 (+)
G934640 NA other downstream 1169340 1908660 ~ 1909080 (+)

Expression


Co-expression Network