G933718


Basic Information

Item Value
gene id G933718
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 776376 ~ 776878 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1064542
TCAGATATTAGGAGTAGCGCTGACCGTCCCATTCAGATATTAGGAGTAGCGCTGACCGTCCCATTAAAATATTAGGAGGAGCGCTGACCGTCCCATTCAGATATTAGGAGTAGCGCTGACCGTCCCATTCAGATATTAGGAGTAGCGCTGACCGTCCCATTCAGATATTAGGAGTAGCGCTGACCGTCCCATTCAGATATTAGGAGTAACGCTGACCGTCCCATTCAGATATTAGGAGTAGCGCTGACCGTCCCATTCAGATATTAGGAGTAGCGCTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1064542 True 279 lncRNA 0.49 2 776376 776878

Neighbor

gene id symbol gene type direction distance location
LOC110535151 LOC106579763 coding upstream 129415 632123 ~ 646961 (+)
LOC110536523 LOC106563098 coding upstream 172037 575640 ~ 604339 (+)
LOC118937458 LOC106594516 coding upstream 211800 561434 ~ 564576 (+)
LOC110535152 LOC106590691 coding upstream 234023 485692 ~ 542353 (+)
slc22a13b NA coding upstream 337846 392112 ~ 438530 (+)
fam162a e2ig5 coding downstream 576111 1352989 ~ 1364272 (+)
nktr nktr coding downstream 612495 1389373 ~ 1479628 (+)
LOC110535167 LOC106579754 coding downstream 1066286 1839051 ~ 1855581 (+)
si:ch73-206p6.1 LOC106579752 coding downstream 1599823 2376701 ~ 2387592 (+)
plod2 LOC106579751 coding downstream 1642461 2419339 ~ 2530974 (+)
G933686 NA non-coding upstream 37056 738714 ~ 739320 (+)
G933684 NA non-coding upstream 37856 738217 ~ 738520 (+)
G933677 NA non-coding upstream 124120 651588 ~ 652256 (+)
G933676 NA non-coding upstream 128303 647852 ~ 648073 (+)
G933650 NA non-coding upstream 150978 625165 ~ 625398 (+)
G933755 NA non-coding downstream 73395 850273 ~ 851515 (+)
G933692 NA non-coding downstream 89004 865882 ~ 873581 (+)
G933762 NA non-coding downstream 96843 873721 ~ 875058 (+)
G933765 LOC106579760 non-coding downstream 105755 882633 ~ 889992 (+)
G933768 NA non-coding downstream 117926 894804 ~ 915446 (+)
G933679 NA other upstream 48171 725187 ~ 728205 (+)
G933532 LOC106594516 other upstream 213717 539980 ~ 562659 (+)
G933799 NA other downstream 172653 949531 ~ 951584 (+)
G934169 NA other downstream 530649 1307527 ~ 1307759 (+)
G934256 NA other downstream 711198 1488076 ~ 1496014 (+)
G934579 NA other downstream 1049749 1826627 ~ 1827366 (+)
G934640 NA other downstream 1131782 1908660 ~ 1909080 (+)

Expression


Co-expression Network