XLOC_028501


Basic Information

Item Value
gene id XLOC_028501
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007115.7
NCBI id CM002888.2
chromosome length 78093715
location 7598210 ~ 7653189 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00057325
TCAAGATTTGCAAAAGTGTAGTTCAGAGAAatctccacaggagggcgcaatatttgatacatatgtaatatttgtctatttgtctattgttagatcagatattcagcgtgtgtaaaaatgtgtttatttgtgtgtcgactctacaggatcagtgaagtgttgtggactgtaagcctgttgaacagaagcagagacgagtggacagacactgactgtactgatgatgatcatctgctgctgcacaggctgtaaagtataacccctgctggacacggctccggaagctccagggggagaccgaactggtatccccccttcttcaggcgcgcctcacactcactcaccattCTCTCATATCGCAGAGTTCTGGCTggccttgaaccagcaacccctgAAGCCGTGGGGCAGCGCTCTTACCACAGAGCCACAGATCTCCTGTCTGAACTCTTGCTGGAACTGAGTTTTGACTCAATCC
>TCONS_00058049
cacgtgtgtatcttcactgctgcagaggagagagagagagagagcaatgactgaacacaaacactacaACAACATCACTACAAACTAAACCAACGAAGCAAAGTCCCTTACAGGTGAGTCGCGTTACTCTCCATTTCTGCACTTGGTGTGGCTTTTCTTCACTGTCGGGCTGTAATatctgctgttgactgacattaTGAGTCTGTCACTGAGCTGTCATCTGCTGGAGCTCAACTTGACGCCAGTAAAACGGTGTACCTGTGCTGATCTGGTGTCACCTTTGCTGTCAAAGGTGTTCAGGCTAAAGAGCAGCTCGCTGATGCCGCCTAGTGGAGCGGATTGAGAACTGCGTATAGATTACCTGGAGTCACATCACATCAGTGTACACATGCTGTAACATCATGTAGCAACAACAAAATAATCGATACTTTATGTAATATATGTAAGTTAAATCTGCAGTTTGTAACTGTTTTTACAAAACTTATAAATAAATTGCGAAAGTTGCAGTGTTAGTGTTTGGtgagactgtttttatttgtttattatttcattttttattttaacaaatacaatatCAGTACTTAACAAGTTCAAAATATCAAATTCAGCAGTCAGTAGTATGGTTCAGTCGTTACACATTACTGTGGCTAAATAGACTGCATATTGACATTTTAGACAGAAAggaggaaaagaaaaacaaaaggggCATTACAgcaaaatatacaatattttattagaGACGTAGCTCTGtttacagttaaaaaaattaatacattattaaaaatcaataaatttgcAAAGTTGGGGTTTAGGTTACTCCATTTGGATTGATGAATATAATAGTAAGAATAGTGTGATTTAGCTTCTGCACTTCAGTACATTTCTCCACCTCTAATTTATTAGAGTACTTTTATTCAGGTAAAAGTTAGTTCATATTTCAaagaattacatttaaatgttaactcctatacatttatgcatttgaagGTGCGGTAAAGTTAAATGTTGTAAAGTTATTTTGAGAGGAGTctgaatgcagacctggtgcagtgcaatctgagccgcatccaatgctttttaatgcgctcacctaaccccacccctcacagtgacgtcactagctgcattaagtgcattgtgtctgacattgcatctctgaaatATGCAGCCTCAGCTTGTATCATCAAGGCAGAATCTAGATACTGttgattatttttaaaactaGAGAAATCTTCAGCTGATAGACATGATAGACGTCTTCACATGATAGCGGAGCTCAGTTCATTATCAAACTACTTCTTCTCAGTTAAAGTGTTGCGCAAATCACACTCAACATAAATCCTTTGAACTGAACTAATCTGACTGCAGCTCTTCTGGAGTGATCTGTATGCTGGTCGAGAGAGCTCAAACAATTTCTGCAAGTTAAGAAAACATGTGCAAATTGAGAAAACATCTTCATCTATTTGACAAAACACATATTCTCACAAGACATGCAATATAGACTCACACATAAAGCACAGACAGGAATGTGTCAGGGGGCCCCAGAATGTAATGCACCAGCTCTTTCCTGTTTAAAATCAGTGGCAGCATATGATCAAGATAGTAAAATTAATATGAGCtcaaaatgcatgtatttaccaTCAATCTGCTTTGAAATGTTGTTAACAGTTTAGCTGTTTGTAGAGTATAAATGATAAAATGTTTGGGAAAAAAGTGCTCATTGCATGCATTTTGTGTGAAAGCAATGAAAAATGATTGACCGTTTGCTCCCTGTAGACTTCTGTTAAGCTGTTTGAGTCAACAGTATGGAAAACGTGGCTTCAGATCTCCACAATGCCTGTTAGAAGTTGAAAAGAGCTTAACATTTATAATATGTTTAATTCTGATGTATAACACTGTTCAGCACAAATAAAAAGCCGTTAATAACTGGGAATAACTCAGTgttattaataatgtataaaataaaaatacagataaatGTGGTGCTTTGTGGTGGTTAAAACTGTTAGAATAAAATAATCATCTCTAATATTCAAAAACCTTGACGTGCAAGCAGGATCAGTGTTGAAGTCTTCATTAAATAAATGACGCTTTAAAGTTACACTAAAAGAAGAGAGGATCTCGTATATTGATTTGTTTCAAATTCCTTTATCTTCACATTTTTCTTGCATCCTGAGGTGAAAAGGAAGGAAAGTAAATGAGGAAAGTAACGGAGGAAGCAGAAATAAGAATTAAGAAGCACCAAGAGTCTCCAGTTAAGAGAAAATCACTGATTTCACAAGTCTGACTGAGAGTGAAGAGAACAGGACGCCCTCGGAGTCAAGATTATTATCATTTAGCATTTGTAATTTAggttttatttcaatactttctTTAAATTTGCTGTCAGTTTCAGTTCATTTCATTAATGgctttattagttttagtttagtttttatcttGTGAACACGTCTCTGTTTAGTTTTTATGTTTACTTTCAGCTTTACTTTTAGTAATTCTAGTTCCAGAGCAAAGTTGAGTGTTTACACAGATTATATTTTACTCTTagtaacacaaataaaacaattatttaacaaACACCGAATCCAAAATTATTCAGACAAATTCTGCAGAATTTATACTTCAACATCTGTATATTAAATATCACACTGTATATGTAGATAAACATGCCTAGTTTAAAAAAGGCATGTTTATAATCTTTATCTTGACCGCTGTGTTTGGCTGTAAAAGCACATCTACAGCTGTTTCTCTAAACAGGTCTGATGTTTTCTTTTTGccgatgattattttattttagttaatgtaCATGTATTTTGGCCGatagttttagtcttagttttcatttactaaaataacctcTGAGCTTGAGTGTGTCTGGCTGTTTCTAATCATAGTAACACTAAAATCATGTTCACTACTGTCAGTTGTTTGTGAAATAAATTTGAGGTTAAAGGTGAAGCATGTTGTAAGCCCAGTGTATGAATTACGGTCTGTACTTGTGAGTTTGAACTGAACTTATAcagttcatttatttcatttcagtctGTCAAAACTATAGAACTTCTCTTGATCATGGTCCTGGATGCTCCAGGGGAAATGCTTATTTACCAAAAACTCCACAAGAGGGCGAAATGTTTCAGTTCATTACTTTAGATTTGCAAttgtgtaattcaccaaaatctCCACAGGAGGGTAAAACTTTGAATTTCATTATTTTAGAAAGGCAGCAGTGCAGTTCACAAATATCACCACAAGAGGGCGAATATTTTAATATCATCAAGTTCGCAGTggtgtaattcagaaatatctccacaggagggAGAAACCTTCATTATTTTAGAGCGACAGCAGTGCAGTCCACAAAAATCCCCACAAGAGGGCGAATATTTTCAATTCAGTAGATTCAAGATTTGCAAAAGTGTAGTTCAGAGAAatctccacaggagggcgcaatatttgatacatatgtaatatttgtctatttgtctattgttagatcagatattcagcgtgtgtaataatgtgttgatttgtgtgtcgactctacaggatcagtgaagtgttgtggactgtaagtctgttgaacagaagcagagacgagtggacagacactgactgtactgatgatgATCATCTGCTGCTGCACAGGTGATGTAGATCATGTGTGTGATTGGTTGTGTGTATGTGGCTATTCCAcatgtcggttaccatcatttgctttgtggagggtcactcctctacaaagtaaatgatggtaaccgaaatGGGTGGGGAAGGGACGCAGGTCCagaatttttatacagttcattttaaatttttttgccaggctgtaaagtataacccctgctggacacggctccggaagc
>TCONS_00058050
CTCTGGTTCCAAAAATCATTACTGGTTCTTGCAAAGGCAAGAAAgcaatattaggaaataaatatTGTCTTCTTCACACAGTTGTGTATTATTTCACAgaataaaaatgatgatgacTCATCCTGCACTACACCAAatctgtccaatcaaatgctttctagagCAAGACCCTCCCCCAACACAACATGTGACAGACCGGCAGCACAACAAACACATCTTCTGGACTCTCTTCTGGTAATATGAGCTCCTAAATACCTTTCCTGATGCTTTGAATCCGCCTGGATGTGGACAAAGGTGTCAGGTGAAAGCTGTGCAGCtgaaacacaacagacacacgaGTGTCTTCGCTGCTGCAGATCCGCCCTCACTGTCATTCAGCTGCAGAGGAGAGCGAGAGAGcaatgaatgaacacaaacacTGCAACAACATCACTACAAACTTACTACATTACTCTCAGGACTTCACACACCAGCGCTTCTTCACGCCGAAAGAAAGTCACAGgatcagtgaagtgttgtggactgtaagtctgttgaacagaagcagagacgagtggacagacactgactgtactgatgatgATCATCTGCTGCTGCACAGGTGATGTAGATCATGTGTGTGATTGGTTGTGTGTATGTGGCTATTCCAcatgtcggttaccatcatttgctttgtggagggtcactcctctacaaagtaaatgatggtaaccgaaatGGGTGGGGAAGGGACGCAGGTCCagaatttttatacagttcattttaaatttttttgccaggctgtaaagtataacccctgctggacacggctccggaagc
>TCONS_00058051
CTTCTTCACACAGTTGTGTATTATTTCACAgaataaaaatgatgatgacTCATCCTGCACTACACCAAatctgtccaatcaaatgctttctagagCAAGACCCTCCCCCAACACAACATGTGACAGACCGGCAGCACAACAAACACATCTTCTGGACTCTCTTCTGGTAATATGAGCTCCTAAATACCTTTCCTGATGCTTTGAATCCGCCTGGATGTGGACAAAGGTGTCAGGTGAAAGCTGTGCAGCtgaaacacaacagacacacgaGTGTCTTCGCTGCTGCAGATCCGCCCTCACTGTCATTCAGCTGCAGAGGAGAGCGAGAGAGcaatgaatgaacacaaacacTGCAACAACATCACTACAAACTTACTACATTACTCTCAGGACTTCACACACCAGCGCTTCTTCACGCCGAAAGAAAGTCACAGgatcagtgaagtgttgtggactgtaagtctgttgaacagaagcagagacgagtggacagacactgactgtactgatgac
>TCONS_00058052
CAACATGTGACAGACCGGCAGCACAACAAACACATCTTCTGGACTCTCTTCTGGTAATATGAGCTCCTAAATACCTTTCCTGATGCTTTGAATCCGCCTGGATGTGGACAAAGGTGTCAGGTGAAAGCTGTGCAGCtgaaacacaacagacacacgaGTGTCTTCGCTGCTGCAGATCCGCCCTCACTGTCATTCAGCTGCAGAGGAGAGCGAGAGAGcaatgaatgaacacaaacacTGCAACAACATCACTACAAACTTACTACATTACTCTCAGGACTTCACACACCAGCGCTTCTTCACGCCGAAAGAAAGTCACAGgatcagtgaagtgttg
>TCONS_00058053
ctgctgcagaggagagagagagagagagagcaatgactgaacacaaacactacaACAACATCACTACAAACTAAACCAACGAAGCAAAGTCCCTTACAGGTGAGTCGCGTTACTCTCTATTTCTGCACTTGGTGTGGCTTTTCTTCGCTGTCGGGCTGTAATatctgctgttgactgacattaTGAGTCTGTCACTGAGCTGTCATCTGCTGGAGCTCAACTTGACGCCAGTAAAACGGTGTACCTGTGCTGATCTGGTGTCGCTGTTGTCAAAGGTGTTCAGGCTAAAAGAGCAGCtcgctgaataaataaatactatttaaatcagGATCGGCAGAGAGGCAGGAATTAAACTCAGATCATCGTGAGCACAGTTTTGCTACATGTCTGTCTGTTTAACTAAtctttaatgtttaaagcatATACTCAAATATCTAATCATTCATAAGTGATTAattttctcactttatttagagTTTCAGGGCATATTTTTGATTGACAGTGTAGAAATATcaaataattatcattaaaatatgaaacaatttTCAAAAAACTATTGATTTCAGGctcaacataaaaaatattgttgaataaaatgtaaaacataaacaaactgatCAGTGAATGTCCGCTTGAACTGAGAAAATGTGACTTTAAACAGAGAGCAGCTGAAGCTGTATTGATTTGTTTTACTGTCTTTACTGCAGATGAAGTTGGTATGTGCTTGTCAAATAAACATTTCAGACGTTTCTATGGATGCTGCACAATTTTTATGTCAAATTTAAGAATTTGAGTCctgaagaataaataaatcagtggagATGTCCAATAGCAGAGATTCACTGTGTTTGTTTACAGTCTACTGTGGACATCAGCTgattcacaaacacattcatattaTCCACATTCAGTGCACTGCTGAGTCCTCTGCCATTTTGATCTATATAAGAGTATTTTGTAGTCTGCTGAGTATAAGTGTGTACATACtacaaaatgcacatttaaaaatagtcaATCACTCGGCTATTACTGTAATCTTTCTGAAGTGAAAGAACTGCAAAACACTTTATTAAACACCAACAGTTGAagcagaggttgatattaattctGCCTGTTTTATATCAGAGCTTCAAAATACAACAGAATAAATCTCTGCCGGTCTCTTTtgttaagtttaattataatGTAGCCTAAATTTATCCATAACACAATAATGCAGGCCGCAAGTCAGATCACAGCTTACTCAAATTCATAAATATGGTTGATATGAACCTTCTGACTCTAGTCATATTTTATAGGAAATGAATGAGCATATTAAACTGTTTCTGGAGGTTTACCTAAACAAATCACAAACCTACtaaatatcagagaacaattgaGCTTATTGAATCAATGCAGAATATGCAGCACCTCAGAATCATTCGATTTGCAAAggtgtaattcagaaatatctTTACACAAGCGTGAAACGTTtaacttcattattttataacagcAGCAGTGCAGTTCACAAACATCAGCACAAgagtaatatatattataatattttaaactcaTAAGATTTGTTATGGTGTACTTCTGAGAAATCTCTAAACGAGGGCAATAAAATGTTGGTTGTCAGCAATAGAGGAGGAAAATACACATAACGACAGCTGCGCCACAGGAAGGAGAAATCTCAGTGCTTTACATTTGCTGTGCTAAAATTCAGAAAAAACATCAGCACAATCTTTCAAATCAATAAATCTGGAAATgtgtaattcagaaatatctccacaggagggAGAAACTTTGCATTTGAGTATTTTAGAATGGCAGCAGTGCAGTTCACAAAAATCACCACAAGAAGGTGCTGTTATAgcgaatattttaaattcagCAGATTTAAGATTTGCAAAGGTGTAATTCAAAATAatctccacaggagggcgcaatatTTGATACACATGTAATATTTGTCTATTTGTCTATTGTTAGATCAGATATTCAGCGTGTGTAATAATGTGTTGATTTGTGTGTCGACTCTACAGGATCAGTGAAGTGTTGTGGACTGTAAGCCTGTTAAACAGAAGCAGAGACGAGTGGACAGAcactgactgtactgatgatgatcatctgctgctgcacaggtgatgtacatcatgtgtgtgattgtgtgtgtgtttgtcttgcacatgtcggttaccatcatttgctttgtggagggtcactcctctacaaagtaaatgatggtaaccgaaacgGGTGGGGAAGGGACGAAGGCCCagaatttttatacagttcattttaaattttttgccaggctgtaaagtataacccctgctggacacggctccggaagc
>TCONS_00058054
ACAACAAACACATCTTCTGGACTCTCTTCTGGTAATATGAGCTCCTAAATACCTTTCCTGATGCTTTGAATCCGCCTGGATGTGGACAAAGGTGTCAGGTGAAAGCTGTGCAGCtgaaacacaacagacacacgaGTGTCTTCGCTGCTGCAGATCCGCCCTCACTGTCATTCAGCTGCAGAGGAGAGCGAGAGAGcaatgaatgaacacaaacacTGCAACAACATCACTACAAACTTACTACATTACTCTCAGGACTTCACACACCAGCGCTTCTTCACGCCGAAAGAAAGTCACAGGATCAGTGAAGTGTTGTGGACTGTAAGCCTGTTAAACAGAAGCAGAGACGAGTGGACAGAcactgactgtactgatgatgatcatctgctgctgcacaggtgatgtacatcatgtgtgtgattgtgtgtgtgtttgtcttgcacatgtcggttaccatcatttgctttgtggagggtcactcctctacaaagtaaatgatggtaaccgaaacgGGTGGGGAAGGGACGAAGGCCCagaatttttatacagttcattttaaattttttgccaggctgtaaagtataacccctgctggacacggctccggaagc
>TCONS_00058055
ATGTGACAGACCGGCAGCACAACAAACACATCTTCTGGACTCTCTTCTGGTAATATGAGCTCCTAAATACCTTTCCTGATGCTTTGAATCCGCCTGGATGTGGACAAAGGTGTCAGGTGAAAGCTGTGCAGCtgaaacacaacagacacacgaGTGTCTTCGCTGCTGCAGATCCGCCCTCACTGTCATTCAGCTGCAGAGGAGAGCGAGAGAGcaatgaatgaacacaaacacTGCAACAACATCACTACAAACTTACTACATTACTCTCAGGACTTCACACACCAGCGCTTCTTCACGCCGAAAGAAAGTCACAGgatcagtgaagtgttgtggactgtaagcctgttgaacagaagcagagacgagtggacagacactgactgtactgatgatgatcatctgctgctgcacaggtgatgtagatcatgtgtgtgattggttgtgtg
>TCONS_00058056
ACTACACCAAATCTGGCCAATCACATGCTCTCCACAGAAAGTCCCTCCCCCAACAAACACGCGACAGAGCAGcagcacaacaaacacactttctggactctctactggaaatatgagctcataaatacctttcctggagctgtgaatccgcctggatgtggaggagcgtCAGCTGTTGAGCGCAGCTCAAAGATCTGCAgcagaaacacaacagacacacgtgtgtatcttcactgctgcagaggagagagagagagagcaatgactgaacacaaacactacaACAACATCACTACAAACTAAACCAACGAAGCAAAGTCCCTTACAGGTGAGTCGCGTTACTCTCCATTTCTGCACTTGGTGTGGCTTTTCCTCACTGTCGGGCTGTAATatctgctgttgactgacattaTGAGTATGTCACTGAGCTGTCATCTGCTGGAGCTCAACTTGACGCCAGTAAAACGGTGTACCTGTGCTGATCTGGTGTCGCTGTTGTCAAAGGTGTTCAGGCTAAATGAGCAGCTCGCTGATTCCACCTAGTGGAGCGGATGGGATCTGCACTTTAATGCAGAAAAATCCATGTCAGCATGCAGATACTATGGGAGAAAGACTGACCAAATCTGCCTCTTgcagtttacaatttttttttcatccactCATTGCGTTTTCATTCATTCGTAGTTTGTTGGTAAAATTATCATTTGTGTCTGCTAAATTAGTTGtgtgctgaattgtacacctgtcacactctaaaacttaatattaatttggttaagagcttattagaaaataaataaactgaatttgtatattaaatagagcatgaactcatacattgtgaatacactttaatgtgtgatgagaacttttaaaatgtttttaataacgtgtgttgtgatggaaatgacatttcaacagtttattgtgaaaataatgaaaaatagcttcaccgattagctttgaattgatacaagcctttcatgtatacaaaacactcttatttaccctcattttgttttggtttttaaaaacatctttgaaggtacagcatgtttggaaatgatgtagaataaatgtatttccttatcaagcaatatttatcttgatttttcttcaagtgttgttgatgAAAACTTAAATTCCCTCCATCCTAtacatgttctcagatggcactattcattttcatagaaaccacctaaataatctttcacacaaacctTTTAAAgagacattacagtgttgtggtggaaatgacactgatactgtgcgacagctatattttatataaaaaataatattgatgataGTCTCACAttattaactataaaatatttaccttatttcactagtgcttcattaagatacattaatagataccagataaataatactttaaaattttcttttcattgttgaagtttaaaactctgagtgtgcgacaaggtgaaaacagtgattttgacacctaaaagaaggttgaataatatgaaaaatatataatagaaaggtagtaattttttaaagaaggttttattgttagtttgacaaagaaagaggacttcgaacaaaattatatatatgtttggatatttgatcaaaggacataaaaatGCTCGTAGTTGAAGAATTAATCAGATCCTGAAAATAGAGATTTGACAGACTCAGACGCTTCAGCTGAACACATCACTACATTAGGTCATGTTTAACTTCAGTCACTGATCAAAATCATGTCAAAGATTaaaaactgattcaaataatcataataataaagtcAACAAGAACAGATTTTGATCCTTCCTGAAACAGATGAAGACAGAAAACGACTCGCTTCAACAGGAAGCAGAACTGTGCTCACGATGACCTCAGTTTAACTCAAGCCTCTCTGTCATTTGAAGATCTCCATAAAAACTGTGTAATATTTAGCATTTGATGATAAGtctctatttaataataattacttttttagtTTAGACCTCAAGACTTTCTGCTTCCTTTTACACATTAAAATGTTTCTGGTTGTCAGCATCAGTGGAGGAAAATACACAGAACTACAGCTGCGCCACAGGAAGGTGAAATCTCAGTGCTTTACATTTGCTGTGCTGAAGTTCAGGAAAAACATCAGCACAATCTTTCAAATCAACTGAACTGCAAAGAtgtaattcagaaatatctccacaggagggcgaCATGTTTAAATTCACACTATTAGATTTGCAGTGGTGTCATTCACCAAAATCACCACACGAGGGCGAACATTTTAAATTCATCAAGTTCGCAGTggtgtaattcagaaatatctccacaggagggAGAAACATTCATTATTTTAGAGCGGCAGCAGTGCAGTCCACAAAAATCCCCACAAGAGGgcgaatattttaaattcagtagATTCAAGATTTGCAAAAGTGTAGTTGAGAGAAatctccacaggagggcgcaatacTTGATACATATGTAATATTTGTCTATTTGTCTATTTTTAGATCAGATATTCAGCGTGTGtaataatgtgtttatttgtgtgtcgACTCTACAGGATCAGTGAAGTGTTGTGGACTGTAAGTCTGTTGAACAGAAGCAGAGACGAGTGGACAGACACTGACTGTACTGATGACTATCATCTGCTGCTGCACAGGTGATGTACATCATGCGTGtgattggttgtgtgtgtgtctgttccacatgtcggttaccatcatttgctttgtggagggtcactcctctacaaagtaaatgatggtaaccgaaacgGGTGGAGAAGGGACGCAGGTCCagaatttttatacagttcattttaaatttttttgccaggctgtaaagtataacccctgctggacacggctccggaagctccagggggagaccgaactggtatccccccttcttcaggcgcgcctcacactcactcaccattcactcatatcgcagagttctggctggccttgaaccagcaacccctgAAGCCGTGGGGCAGCGCTCTTACCACAGAGCCACAGATCTCCATGTCTGAACACTTGCTGGAACTGATGTTGGACTGCTGACCTGTGTGTGAGCTGAttcaataaaacaatatatatgtcAGATCTG
>TCONS_00058057
CTTCTTCACACAGTTGTGTATTATTTCACAgaataaaaatgatgatgacTCATCCTGCACTACACCAAatctgtccaatcaaatgctttctagagCAAGACCCTCCCCCAACACAACATGTGACAGACCGGCAGCACAACAAACACATCTTCTGGACTCTCTTCTGGTAATATGAGCTCCTAAATACCTTTCCTGATGCTTTGAATCCGCCTGGATGTGGACAAAGGTGTCAGGTGAAAGCTGTGCAGCtgaaacacaacagacacacgaGTGTCTTCGCTGCTGCAGATCCGCCCTCACTGTCATTCAGCTGCAGAGGAGAGCGAGAGAGcaatgaatgaacacaaacacTGCAACAACATCACTACAAACTTACTACATTACTCTCAGGACTTCACACACCAGCGCTTCTTCACGCCGAAAGAAAGTCACAGGATCAGTGAAGTGTTGTGGACTGTAAGTCTGTTGAACAGAAGCAGAGACGAGTGGACAGACACTGACTGTACTGATGACTATCATCTGCTGCTGCACAGGTGATGTACATCATGCGTGtgattggttgtgtgtgtgtctgttccacatgtcggttaccatcatttgctttgtggagggtcactcctctacaaagtaaatgatggtaaccgaaacgGGTGGAGAAGGGACGCAGGTCCagaatttttatacagttcattttaaatttttttgccaggctgtaaagtataacccctgctggacacggctccggaagctccagggggagaccgaactggtatccccccttcttcaggcgcgcctcacactcactcaccattcactcatatcgcagagttctggctggccttgaaccagcaacccctgAAGCCGTGGGGCAGCGCTCTTACCACAGAGCCACAGATCTCCATGTCTGAACACTTGCTGGAACTGATGTTGGACTGCTGACCTGTGTGTGAGCTGAttcaataaaacaatatatatgtcAGATCTG
>TCONS_00058058
CAGACCGGCAGCACAACAAACACATCTTCTGGACTCTCTTCTGGTAATATGAGCTCCTAAATACCTTTCCTGATGCTTTGAATCCGCCTGGATGTGGACAAAGGTGTCAGGTGAAAGCTGTGCAGCtgaaacacaacagacacacgaGTGTCTTCGCTGCTGCAGATCCGCCCTCACTGTCATTCAGCTGCAGAGGAGAGCGAGAGAGcaatgaatgaacacaaacacTGCAACAACATCACTACAAACTTACTACATTACTCTCAGGACTTCACACACCAGCGCTTCTTCACGCCGAAAGAAAGTCACAGgatcagtgaagtgttgtggactgtaagcctgttgaacagaagcagagacgagtggacagacactgactgtactgatgatgatcatctgctgctgcacaggt
>TCONS_00055303
AAACACATCTTCTGGACTCTCTTCTGGTAATATGAGCTCCTAAATACCTTTCCTGATGCTTTGAATCCGCCTGGATGTGGACAAAGGTGTCAGGTGAAAGCTGTGCAGCtgaaacacaacagacacacgaGTGTCTTCGCTGCTGCAGATCCGCCCTCACTGTCATTCAGCTGCAGAGGAGAGCGAGAGAGcaatgaatgaacacaaacacTGCAACAACATCACTACAAACTTACTACATTACTCTCAGGACTTCACACACCAGCGCTTCTTCACGCCGAAAGAAAGTCACAGGATCAGTGAAGTGTTGTGGACTGTAAGCCTGTTGAGCAGAAGCAGAGACGAGTGGACAAAcactgactgtactgatgatgatcatctgctgctgcacagcagTAATGAAGTATAACCCCTGCTGGACATGGCTCCGGAAGCTCCAGGGGGAGACCGAACTGGTATCCCCACCTCTCCAGGCACAACTCACTCACTGTGCACTCATATTGCAAAGATCCGGCTGGGATCGATCCAGCAACCATTAAAGTCATGGGGCAGCGATCTTACCACAGAGCCACTGATCTCCTGTCTGGATGCCTGCTGGAATTGATGTCACTGCTGACCTGtttcaataaaacaatatat
>TCONS_00058060
CTGGTTCTTGCAAAGGCAAGAAAgcaatattaggaaataaatatTGTCTTCTTCACACAGTTGTGTATTATTTCACAgaataaaaatgatgatgacTCATCCTGCACTACACCAAatctgtccaatcaaatgctttctagagCAAGACCCTCCCCCAACACAACATGTGACAGACCGGCAGCACAACAAACACATCTTCTGGACTCTCTTCTGGTAATATGAGCTCCTAAATACCTTTCCTGATGCTTTGAATCCGCCTGGATGTGGACAAAGGTGTCAGGTGAAAGCTGTGCAGCtgaaacacaacagacacacgaGTGTCTTCGCTGCTGCAGATCCGCCCTCACTGTCATTCAGCTGCAGAGGAGAGCGAGAGAGcaatgaatgaacacaaacacTGCAACAACATCACTACAAACTTACTACATTACTCTCAGGACTTCACACACCAGCGCTTCTTCACGCCGAAAGAAAGTCACAGGATCAGTGAAGTGTTGTGGACTGTAAGCCTGTTGAGCAGAAGCAGAGACGAGTGGACAAAcactgactgtactgatgatgatcatctgctgctgcacaggtgatgtagatcatgtgtgtgattgtgtgttgtCTTACCCTAATTACGTTGGTTACCATCAGTTACTTTGTGGAGGGTCACTCCTCTAGAAAGCAAATGATGGTAAACGAAACAGGTGAGGAAGGTCCAAAGATTttcattatatatacattttatttttttccagcagTAATGAAGTATAACCCCTGCTGGACATGGCTCCGGAAGCTCCAGGGGGAGACCGAACTGGTATCCCCACCTCTCCAGGCACAACTCACTCACTGTGCACTCATATTGCAAAGATCCGGCTGGGATCGATCCAGCAACCATTAAAGTCATGGGGCAGCGATCTTACCACAGAGCCACTGATCTCCTGTCTGGATGCCTGCTGGAATTGATGTCACTGCTGACCTGtttcaataaaac

Function

GO:

id name namespace
GO:0016072 rRNA metabolic process biological_process
GO:0022613 ribonucleoprotein complex biogenesis biological_process
GO:0006364 rRNA processing biological_process
GO:0043603 cellular amide metabolic process biological_process
GO:0043604 amide biosynthetic process biological_process
GO:1901566 organonitrogen compound biosynthetic process biological_process
GO:0009058 biosynthetic process biological_process
GO:0009059 macromolecule biosynthetic process biological_process
GO:0043043 peptide biosynthetic process biological_process
GO:1901576 organic substance biosynthetic process biological_process
GO:0006412 translation biological_process
GO:0010467 gene expression biological_process
GO:0044249 cellular biosynthetic process biological_process
GO:0042254 ribosome biogenesis biological_process
GO:0042255 ribosome assembly biological_process
GO:0000470 maturation of LSU-rRNA biological_process
GO:0044271 cellular nitrogen compound biosynthetic process biological_process
GO:0042273 ribosomal large subunit biogenesis biological_process
GO:0061028 establishment of endothelial barrier biological_process
GO:0006518 peptide metabolic process biological_process
GO:0034645 cellular macromolecule biosynthetic process biological_process
GO:0044391 ribosomal subunit cellular_component
GO:1990904 ribonucleoprotein complex cellular_component
GO:0022625 cytosolic large ribosomal subunit cellular_component
GO:0022626 cytosolic ribosome cellular_component
GO:0022627 cytosolic small ribosomal subunit cellular_component
GO:0044444 obsolete cytoplasmic part cellular_component
GO:0044445 obsolete cytosolic part cellular_component
GO:0044446 obsolete intracellular organelle part cellular_component
GO:0005829 cytosol cellular_component
GO:0005840 ribosome cellular_component
GO:0005854 nascent polypeptide-associated complex cellular_component
GO:0032991 protein-containing complex cellular_component
GO:0015934 large ribosomal subunit cellular_component
GO:0015935 small ribosomal subunit cellular_component
GO:0043228 non-membrane-bounded organelle cellular_component
GO:0043232 intracellular non-membrane-bounded organelle cellular_component
GO:0005737 cytoplasm cellular_component
GO:0005198 structural molecule activity molecular_function
GO:0003723 RNA binding molecular_function
GO:0003735 structural constituent of ribosome molecular_function

KEGG:

id description
ko00230 Purine metabolism
ko00240 Pyrimidine metabolism
ko03020 RNA polymerase
ko03230 Viral genome structure
ko05164 Influenza A
ko05169 Epstein-Barr virus infection
ko05016 Huntington disease
ko03200 Viral proteins

Ensembl:

ensembl_id ENSDARG00000101254

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00057325 False 475 lncRNA 0.48 2 7598210 7631260
TCONS_00058049 False 3866 lncRNA 0.36 1 7598400 7602265
TCONS_00058050 False 819 lncRNA 0.45 2 7598400 7653189
TCONS_00058051 False 513 lncRNA 0.46 2 7607656 7653121
TCONS_00058052 False 337 lncRNA 0.48 2 7611868 7653008
TCONS_00058053 False 2339 lncRNA 0.36 1 7615677 7618015
TCONS_00058054 False 611 lncRNA 0.46 2 7615677 7652986
TCONS_00058055 False 449 lncRNA 0.48 2 7619945 7653004
TCONS_00058056 False 3093 lncRNA 0.38 1 7626078 7629170
TCONS_00058057 False 985 lncRNA 0.48 2 7626078 7653121
TCONS_00058058 False 412 lncRNA 0.48 2 7640406 7652998
TCONS_00055303 False 639 lncRNA 0.49 3 7650003 7652981
TCONS_00058060 True 985 lncRNA 0.45 2 7650010 7653168

Neighbor

gene id symbol gene type direction distance location
XLOC_028500 NA coding downstream 16777 7578861 ~ 7581433 (-)
XLOC_028499 NA coding downstream 31703 7557414 ~ 7566507 (-)
XLOC_028498 NA coding downstream 52093 7538015 ~ 7546117 (-)
XLOC_028497 si:ch211-170p16.1 coding downstream 366730 7229236 ~ 7231480 (-)
XLOC_028496 CR354372.1 coding downstream 375843 7222080 ~ 7222367 (-)
XLOC_028503 lta4h coding upstream 418 7653607 ~ 7673165 (-)
XLOC_028504 BX649411.3 coding upstream 26790 7679979 ~ 7680095 (-)
XLOC_028505 cdk17 coding upstream 65665 7718854 ~ 7811925 (-)
XLOC_028506 mcm10 coding upstream 197940 7851129 ~ 7869731 (-)
XLOC_028507 nudt5 coding upstream 217195 7870384 ~ 7876005 (-)
XLOC_028494 FO681358.2 non-coding downstream 412899 7185195 ~ 7185311 (-)
XLOC_028508 NA non-coding upstream 318493 7971682 ~ 7973335 (-)
XLOC_028515 CU695020.1 non-coding upstream 488160 8141349 ~ 8141466 (-)
XLOC_028516 NA non-coding upstream 559981 8213170 ~ 8214435 (-)
XLOC_028517 NA non-coding upstream 566272 8219461 ~ 8219991 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
eurasian perch (Perca fluviatilis) G29441 NA non-coding NC_053114.1 CM020911.1 23816706 ~ 23879442 (+)