G934440


Basic Information

Item Value
gene id G934440
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 1639589 ~ 1639822 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1065412
caaagcagttcgacagatacaacgacacagagttacacatggagtaaaacaaacatacagtcaataataaagtataaacaagtctatatacgatgtgagcaaatgaggtgagaagggaggtaaaggcaaaaaaggccatggtggcaaggtaaatacaatatagcaagtaaaacactggaatggtagttttgcaatggaagaatgtgcaaagtagaaataaaaataatggggtgc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1065412 True 234 lncRNA 0.37 1 1639589 1639822

Neighbor

gene id symbol gene type direction distance location
nktr nktr coding upstream 159961 1389373 ~ 1479628 (+)
fam162a e2ig5 coding upstream 275317 1352989 ~ 1364272 (+)
LOC110535150 LOC106590688 coding upstream 780058 742492 ~ 859531 (+)
LOC110535151 LOC106579763 coding upstream 992628 632123 ~ 646961 (+)
LOC110536523 LOC106563098 coding upstream 1035250 575640 ~ 604339 (+)
LOC110535167 LOC106579754 coding downstream 203342 1839051 ~ 1855581 (+)
si:ch73-206p6.1 LOC106579752 coding downstream 736879 2376701 ~ 2387592 (+)
plod2 LOC106579751 coding downstream 779517 2419339 ~ 2530974 (+)
LOC118937290 NA coding downstream 1608004 3247826 ~ 3249391 (+)
LOC118937434 NA coding downstream 1762230 3402052 ~ 3402867 (+)
G934417 NA non-coding upstream 17177 1622182 ~ 1622412 (+)
G934396 NA non-coding upstream 32244 1607117 ~ 1607345 (+)
G934395 NA non-coding upstream 33171 1606128 ~ 1606418 (+)
G934256 NA non-coding upstream 143575 1488076 ~ 1496014 (+)
G934254 NA non-coding upstream 149617 1486923 ~ 1489972 (+)
G934462 NA non-coding downstream 48160 1687982 ~ 1688592 (+)
G934469 NA non-coding downstream 56099 1695921 ~ 1696162 (+)
G934471 NA non-coding downstream 59918 1699740 ~ 1699957 (+)
G934477 NA non-coding downstream 67722 1707544 ~ 1707853 (+)
G934478 NA non-coding downstream 68082 1707904 ~ 1708239 (+)
G934169 NA other upstream 331830 1307527 ~ 1307759 (+)
G933799 NA other upstream 688005 949531 ~ 951584 (+)
G933679 NA other upstream 911384 725187 ~ 728205 (+)
G934579 NA other downstream 186805 1826627 ~ 1827366 (+)
G934640 NA other downstream 268838 1908660 ~ 1909080 (+)
G935846 NA other downstream 1910217 3550039 ~ 3550487 (+)
G935976 NA other downstream 2340949 3980771 ~ 3981151 (+)
G935977 NA other downstream 2342029 3981851 ~ 3982198 (+)

Expression


Co-expression Network