G934478


Basic Information

Item Value
gene id G934478
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 1707904 ~ 1708239 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1065451
cccaccaacacatctctactctctcccaccaatacatctctactctctcccaccaatacatccatactctctcccaccaacacatctctctctctcccaccaacacatctctactctctcccaccaatgcatctctctctctctcccaccaacacatctctactctctcccaccaatacatctctctctctctctcccaccaatacatctctctctcccaccaataaatccttactctctcccaccaacacatctccctctctcccaccaatacatctctactctctcccaccaacacatccctactgtctcccaccaatgcatctctatctctcc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1065451 True 336 lncRNA 0.49 1 1707904 1708239

Neighbor

gene id symbol gene type direction distance location
nktr nktr coding upstream 228276 1389373 ~ 1479628 (+)
fam162a e2ig5 coding upstream 343632 1352989 ~ 1364272 (+)
LOC110535150 LOC106590688 coding upstream 848373 742492 ~ 859531 (+)
LOC110535151 LOC106579763 coding upstream 1060943 632123 ~ 646961 (+)
LOC110536523 LOC106563098 coding upstream 1103565 575640 ~ 604339 (+)
LOC110535167 LOC106579754 coding downstream 134925 1839051 ~ 1855581 (+)
si:ch73-206p6.1 LOC106579752 coding downstream 668462 2376701 ~ 2387592 (+)
plod2 LOC106579751 coding downstream 711100 2419339 ~ 2530974 (+)
LOC118937290 NA coding downstream 1539587 3247826 ~ 3249391 (+)
LOC118937434 NA coding downstream 1693813 3402052 ~ 3402867 (+)
G934477 NA non-coding upstream 51 1707544 ~ 1707853 (+)
G934471 NA non-coding upstream 7947 1699740 ~ 1699957 (+)
G934469 NA non-coding upstream 11742 1695921 ~ 1696162 (+)
G934462 NA non-coding upstream 19312 1687982 ~ 1688592 (+)
G934440 NA non-coding upstream 68082 1639589 ~ 1639822 (+)
G934480 NA non-coding downstream 2711 1710950 ~ 1711231 (+)
G934498 NA non-coding downstream 19398 1727637 ~ 1728091 (+)
G934532 NA non-coding downstream 61140 1769379 ~ 1771727 (+)
G934546 NA non-coding downstream 73361 1781600 ~ 1782657 (+)
G934566 NA non-coding downstream 101862 1810101 ~ 1810786 (+)
G934256 NA other upstream 211890 1488076 ~ 1496014 (+)
G934169 NA other upstream 400145 1307527 ~ 1307759 (+)
G933799 NA other upstream 756320 949531 ~ 951584 (+)
G933679 NA other upstream 979699 725187 ~ 728205 (+)
G934579 NA other downstream 118388 1826627 ~ 1827366 (+)
G934640 NA other downstream 200421 1908660 ~ 1909080 (+)
G935846 NA other downstream 1841800 3550039 ~ 3550487 (+)
G935976 NA other downstream 2272532 3980771 ~ 3981151 (+)
G935977 NA other downstream 2273612 3981851 ~ 3982198 (+)

Expression


Co-expression Network