G934480


Basic Information

Item Value
gene id G934480
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 1710950 ~ 1711231 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1065453
CAtcactactctctcccaccaatgcatctctctctcccaccaacacatccctaCTATCTCCCACCAATATAtccctactctctcccaccaatgcatctctactctctcccaccaatacatctctctctctatctctcccaccaacacatctctaatttctcccaccaatacatctctctctcccaccaatacatccttactctctcccaccaatacatctctctctctcccaccaatacatctctctctctcccaccaacacatctctactctctcccacca

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1065453 True 282 lncRNA 0.48 1 1710950 1711231

Neighbor

gene id symbol gene type direction distance location
nktr nktr coding upstream 231322 1389373 ~ 1479628 (+)
fam162a e2ig5 coding upstream 346678 1352989 ~ 1364272 (+)
LOC110535150 LOC106590688 coding upstream 851419 742492 ~ 859531 (+)
LOC110535151 LOC106579763 coding upstream 1063989 632123 ~ 646961 (+)
LOC110536523 LOC106563098 coding upstream 1106611 575640 ~ 604339 (+)
LOC110535167 LOC106579754 coding downstream 131933 1839051 ~ 1855581 (+)
si:ch73-206p6.1 LOC106579752 coding downstream 665470 2376701 ~ 2387592 (+)
plod2 LOC106579751 coding downstream 708108 2419339 ~ 2530974 (+)
LOC118937290 NA coding downstream 1536595 3247826 ~ 3249391 (+)
LOC118937434 NA coding downstream 1690821 3402052 ~ 3402867 (+)
G934478 NA non-coding upstream 2711 1707904 ~ 1708239 (+)
G934477 NA non-coding upstream 3097 1707544 ~ 1707853 (+)
G934471 NA non-coding upstream 10993 1699740 ~ 1699957 (+)
G934469 NA non-coding upstream 14788 1695921 ~ 1696162 (+)
G934462 NA non-coding upstream 22358 1687982 ~ 1688592 (+)
G934498 NA non-coding downstream 16406 1727637 ~ 1728091 (+)
G934532 NA non-coding downstream 58148 1769379 ~ 1771727 (+)
G934546 NA non-coding downstream 70369 1781600 ~ 1782657 (+)
G934566 NA non-coding downstream 98870 1810101 ~ 1810786 (+)
G934567 NA non-coding downstream 99775 1811006 ~ 1811312 (+)
G934256 NA other upstream 214936 1488076 ~ 1496014 (+)
G934169 NA other upstream 403191 1307527 ~ 1307759 (+)
G933799 NA other upstream 759366 949531 ~ 951584 (+)
G933679 NA other upstream 982745 725187 ~ 728205 (+)
G934579 NA other downstream 115396 1826627 ~ 1827366 (+)
G934640 NA other downstream 197429 1908660 ~ 1909080 (+)
G935846 NA other downstream 1838808 3550039 ~ 3550487 (+)
G935976 NA other downstream 2269540 3980771 ~ 3981151 (+)
G935977 NA other downstream 2270620 3981851 ~ 3982198 (+)

Expression


Co-expression Network