G934546


Basic Information

Item Value
gene id G934546
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 1781600 ~ 1782657 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1065553
cacgaatttgtcatgctcaaaaaattttagatgtatttttttttgtttcttactttttcaaagtcactgtgcatttggaatatgttttaatgggcaggtaccatcacgaatttgtttatcgaatttgtttatgtttacttactttttcaaagtcactgtgcatttgcaatatgtttcaatgggcaggtaccatcacgaatttgtcatgctcaacattttttagatgtatttttttttgtttccttactttttcaaagtcactgtgcatttggaatatgttttaatgggcaggtaccatcacgaatttgtttatcgaatttgtttatgtttccttactttttcaaagtcactgtgcatttgcaatatgtttcaatgggcaggtaccatcacgaatctgtttatcgaatttgtttatgtttccttactttttcaaagtcactgtgcatttgcaatatgtttcaatgggcaggtaccatcacgaatttgtcatgctcaaaattttttagatgtatttttttttgtttcttactttttcaaagtcactgtgcatttggaatatgttttaatgggcaggtaccatca

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1065553 True 582 lncRNA 0.32 2 1781600 1782657

Neighbor

gene id symbol gene type direction distance location
nktr nktr coding upstream 301972 1389373 ~ 1479628 (+)
fam162a e2ig5 coding upstream 417328 1352989 ~ 1364272 (+)
LOC110535150 LOC106590688 coding upstream 922069 742492 ~ 859531 (+)
LOC110535151 LOC106579763 coding upstream 1134639 632123 ~ 646961 (+)
LOC110536523 LOC106563098 coding upstream 1177261 575640 ~ 604339 (+)
LOC110535167 LOC106579754 coding downstream 60507 1839051 ~ 1855581 (+)
si:ch73-206p6.1 LOC106579752 coding downstream 594044 2376701 ~ 2387592 (+)
plod2 LOC106579751 coding downstream 636682 2419339 ~ 2530974 (+)
LOC118937290 NA coding downstream 1465169 3247826 ~ 3249391 (+)
LOC118937434 NA coding downstream 1619395 3402052 ~ 3402867 (+)
G934532 NA non-coding upstream 9873 1769379 ~ 1771727 (+)
G934498 NA non-coding upstream 53509 1727637 ~ 1728091 (+)
G934480 NA non-coding upstream 70369 1710950 ~ 1711231 (+)
G934478 NA non-coding upstream 73361 1707904 ~ 1708239 (+)
G934477 NA non-coding upstream 73747 1707544 ~ 1707853 (+)
G934566 NA non-coding downstream 27444 1810101 ~ 1810786 (+)
G934567 NA non-coding downstream 28349 1811006 ~ 1811312 (+)
G934570 NA non-coding downstream 32550 1815207 ~ 1815422 (+)
G934576 NA non-coding downstream 42196 1824853 ~ 1825114 (+)
G934577 NA non-coding downstream 42651 1825308 ~ 1825509 (+)
G934256 NA other upstream 285586 1488076 ~ 1496014 (+)
G934169 NA other upstream 473841 1307527 ~ 1307759 (+)
G933799 NA other upstream 830016 949531 ~ 951584 (+)
G933679 NA other upstream 1053395 725187 ~ 728205 (+)
G934579 NA other downstream 43970 1826627 ~ 1827366 (+)
G934640 NA other downstream 126003 1908660 ~ 1909080 (+)
G935846 NA other downstream 1767382 3550039 ~ 3550487 (+)
G935976 NA other downstream 2198114 3980771 ~ 3981151 (+)
G935977 NA other downstream 2199194 3981851 ~ 3982198 (+)

Expression


Co-expression Network